| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5137 |
|---|
| Symbol | |
|---|
| ID | 8336491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5895819 |
|---|
| End bp | 5896766 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644958235 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003115837 |
|---|
| Protein GI | 256394273 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.33827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCACC CCTCGACCTC CGGACCGCTG AGCGAAGGCT CGCATTCCTA CGAAGCCGAC
GGAATCACCT TGCGCTACCA CGTCTTTGGC ACCGGACCGG TGTGCGTGGC AGTTCCCGGC
GGTCCCGGCA TCGCCTGGGA GTACCTGCGC TCCCCAGCGC TCGAGCAGCG CCTGACCATG
GTCTACATGG AACCGGCCGG CACCGGTGAC TCCGGACGCC TGGCGACGCA TCCCCACGGC
TACACCAGGG ACCTGTACAG CCGTCATCTG TCCGAGCTGA TCGACCTCCT CCCTGTCGAG
CGCGTGCACC TGCTGGGGCA CTCGCACGGC GGATTCGTGA CGCAGTACCA CGCGATCCTG
CGCCCGGACC AGCTGGCCGG GATCGTCCTC TACGAAAGCG CCCCGGCCAC CGACCAGGCC
TTCGGCGCCG AAGCCGCGCG GATGGTCGGC GAACTCGCCG AGCGGCACGC CGGCAATCCG
CTGCTGCCCG ACGCCCTGAA CGCGTTCGCG CAGATCCCGC ACATCACCGA CGACGAGTCG
ATGATGCGCG TGGCACGCGG GATCATCCCG GCCTACGTCG CCTCGTACTG GACTGATCCG
GCGCCCTGGA CCGAGCTGCA GAAGGCGCTG CGGGCCACCT ACATCTCCGG GCTGGACGAG
CACGGCGTCC CCGACAGCGT CGACGACCGC GCCGCACTGC CCGCGCTGCG CGTCCCGGCG
CTGGTCGTCG CAGGGCGCTT CGACGTGATC TGCGGGGTGC GCTGGGGTCA GGAACTCCAT
GCCCTGATTC CGGAATCGCG TCTGCTGATC CTGGAGAACA GCGGACACAT GGGGCACTTG
GAGGAACCTG AAGTGTTCGC CGAAGCGGTC GCCGCGTTCG TCTCCGGGTC GGCGTTCAGC
TCGAAGACGG ACATGCGTCA CCACGGTTGT GGAGTAACAG AAAACTGA
|
|---|
| Protein sequence | MAHPSTSGPL SEGSHSYEAD GITLRYHVFG TGPVCVAVPG GPGIAWEYLR SPALEQRLTM
VYMEPAGTGD SGRLATHPHG YTRDLYSRHL SELIDLLPVE RVHLLGHSHG GFVTQYHAIL
RPDQLAGIVL YESAPATDQA FGAEAARMVG ELAERHAGNP LLPDALNAFA QIPHITDDES
MMRVARGIIP AYVASYWTDP APWTELQKAL RATYISGLDE HGVPDSVDDR AALPALRVPA
LVVAGRFDVI CGVRWGQELH ALIPESRLLI LENSGHMGHL EEPEVFAEAV AAFVSGSAFS
SKTDMRHHGC GVTEN
|
|---|
| |