| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5089 |
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| Symbol | |
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| ID | 8336443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5845906 |
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| End bp | 5846634 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958188 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003115790 |
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| Protein GI | 256394226 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.160869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.250223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGAGC GGGCGGCGAC CTGGCGTCTG TTGGTGGTCG ACGACGACCC CGCACTTCGG
CGTGGGCTGG GGCGCGCGCT GGGGCTGTCG GGGTTCGCCG TGGAGACCGC CGCTGACGGG
CAGGCCGCGC TGGCGGTGCT GGGCGGCGGC GGGGTCGACG CGGTGGTGCT GGACGTCTCG
ATGCCGGGTA TATCAGGGGT CGATGTCGTG CGCCGGCTGC GGCGGCAGGG CGACGACGTC
CCGGTACTCA TGCTCTCCGC GCTGGACGAC GTCGCCGACC GGATCGCCGG GTTGGCGGCG
GGCGCCGACG ACTACGTGGT CAAGCCGTTC TCGACCGCTG AGCTGGAGCT GCGGGTGCGC
GCGCTGCTGC GGCGCGGACG TCCCGTGCCG CATGGAGTGG TCGCGGCGTG CGGGATCGTC
ATGGATACCG ATGCCCGGAC GGTTACCGCC GCGGGCTGCC CGCTGGAACT CACTCGGCGC
GAGTTCGATG TCCTGGAGGT GCTTGTCCGC AACGCCGGCG CGGTGCTGAC CCGGGATCAG
CTGCTGGACC GGGTCTGGGG CTACGACTTC CAGGTGCGCT CCGACGCTGT GGACACTGTG
GTCAGCTATC TGCGGCGCAA ACTTGAAGCC GACGACCGGC CGCGTGTCCT GCACACGGTG
CGGGGCGTCG GTTTCGCGCT GCGTGGCGGA CTGGAGCAGC TGGACGGGAT CGGCGGTGAG
CAGCTGTGA
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| Protein sequence | MAERAATWRL LVVDDDPALR RGLGRALGLS GFAVETAADG QAALAVLGGG GVDAVVLDVS
MPGISGVDVV RRLRRQGDDV PVLMLSALDD VADRIAGLAA GADDYVVKPF STAELELRVR
ALLRRGRPVP HGVVAACGIV MDTDARTVTA AGCPLELTRR EFDVLEVLVR NAGAVLTRDQ
LLDRVWGYDF QVRSDAVDTV VSYLRRKLEA DDRPRVLHTV RGVGFALRGG LEQLDGIGGE
QL
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