| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5004 |
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| Symbol | |
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| ID | 8336358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5728247 |
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| End bp | 5729461 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958103 |
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| Product | putative transcriptional regulator, PucR family |
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| Protein accession | YP_003115705 |
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| Protein GI | 256394141 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.351377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.990518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCAG CTCACTCGCC GGAGGTCGAG GCTGAGGCCC GGGCCCTCGT GGCACGGTTC
GCAGAACGGC TCGATGAACT GGCTGATCTC ATGGCCGCGC ACATCCTGGC CGAGTCGGCC
GTATTGCGTT CCTTGGTCGC CGAGCACGAG CTGCGGGTCA CCTGTGCCCA GAACATCAAC
CAGCTGCTGA CCATGCTCGG CGGGCGTCCT CCGGCCGGTT CGGCGCCGGC CGATGCCGGG
CGCGCCGGAG TCCGCGACGG GGTGCCGATG TCGGCGCTGT TCGACGCCTA CCAGATCGGC
GCGACCTTCC TGTGGGAGGA ACTGGCCGAA ACCGGAGCTC ACGGCGAATG GTCAGCCGCC
GCGGTGATCC TGCTCGCGAC CAAGTCCTGG CGGCATCTGC ACGAGTTCAC CACCGCCATG
TCCGAGAGCT ACCGCGCCGA GCTGGAGACG CGGGTCCGCA AGCAGGTCCG CAGACGGTCG
GCGTTGGTGC AGGCACTGTT GGAGGGAAGC CTGGCCGAGC CCGAACTGTG GGAGGCCGCG
GACCTGCTGC GGCTCCCCCA CCGCGGCCCG TACGTGGTGA TCGCCGCGCG GGTGGCCGGT
ATCGCGGAGT CGGCACTGCC GACCATCGAG CAGACCCTCG ACGCCCTCGG CATCGGCTCA
GCCTGGCAGC TCACCCACGA CCTGGAGGTC GGCGTGGCCA GCCTGCCGCG CCCCGGCGAC
CAGTTCGACC GCCTGATCGA GAAGCTCGAC GCCGACGGCG CGAGCCGAGT CGGTGTCAGT
CCCCTGTATG AGGACCTGGC CGCCACCTCG CAGGCCGTGC GCCTGGCGCG GATCGCCCTC
CGCGGCGCCG CCAACCCGGG CCGCGTCGTG GTCTTCGGCC GCGACCCCCT GTCGGTGGCG
GCGGCCAGCG CACCGGACGT GATGGCCCGC CTGGCCCGCA CGATCCTCGC CGGCCTCGAC
GGCATGCCGC CCGAGGACCG CCTCATCCTG CTGGACACCT TCGGAGCATG GCTCGACGGC
GCCGGCTCAG CCGAGGAGGC AGCACGCCGA CTCCATGTGC ACCCGAACAC CGTGCGCTAC
CGCCTCCGCC GCCTTGAGGA ACGCACCGGC CGGGCATTGT CGGACCCGCG GCATGTGGCG
GAGCTGAGCT TGGCCTTCGA AGTTAAGCGC GGGTGGGAGT CAGGGGCGGC AGTCGCGGAG
TCGCACAGCG GGTAG
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| Protein sequence | MAAAHSPEVE AEARALVARF AERLDELADL MAAHILAESA VLRSLVAEHE LRVTCAQNIN
QLLTMLGGRP PAGSAPADAG RAGVRDGVPM SALFDAYQIG ATFLWEELAE TGAHGEWSAA
AVILLATKSW RHLHEFTTAM SESYRAELET RVRKQVRRRS ALVQALLEGS LAEPELWEAA
DLLRLPHRGP YVVIAARVAG IAESALPTIE QTLDALGIGS AWQLTHDLEV GVASLPRPGD
QFDRLIEKLD ADGASRVGVS PLYEDLAATS QAVRLARIAL RGAANPGRVV VFGRDPLSVA
AASAPDVMAR LARTILAGLD GMPPEDRLIL LDTFGAWLDG AGSAEEAARR LHVHPNTVRY
RLRRLEERTG RALSDPRHVA ELSLAFEVKR GWESGAAVAE SHSG
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