| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4979 |
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| Symbol | |
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| ID | 8336333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5692635 |
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| End bp | 5695817 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958078 |
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| Product | coagulation factor 5/8 type domain protein |
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| Protein accession | YP_003115680 |
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| Protein GI | 256394116 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00350881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0761827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAACG GATTGACCCG GCGGCAGTTC ATGAACGGGA TCGGGGGTGC GGCGCTGGCA
ACGACGGTGT TCTCCTCCGG CGCCGCTTTC GCAGCGGACG GCGCTGGCAC TGGCACCGAG
CGAGCGCCCG CGCCCGCGAC CCCGGCGCCC GACGACACGG TTGCCGCCGC GTACTACCAA
TACCTGCTGC GGCACACGAA TTGGGCGCAG CAGAAGTGGG ACGCGACTGC CGGCCACTAT
GCGGCGAGTG ACTACAACTT CGCCGTGGTG CTCGGCAACG CTGTCTTGCT GACGCACGGC
ACCTATGACG CATCCGTCGC GGGCGTGGAT GCCGCGACCC TGAAGACCCA GACCCTCGCC
ACGATCGACC ACTTCGCCGC CAGCAATGTG CTCAACGGCG GTACCGAGTG GGGCGAGACG
ATGTTCTTCG ACAGCACCTT CGAGCTCTAC TTCATCCTCG CCGCCAAGTT GTTGTGGAAC
GACCTCGACG CCGCGACGCA GACCCTGATC GACAAGATGA CCGCGGCGCA GGCGGCGTAC
ACCACGGCCC TGGGCAGCGG GAACGATCCG CGCAGCGGCA GCTGGTCGCC CAACGGGCTG
GCCGGTGGCT GGGAGGGCGA CACCAAAGTC GACGAGATGG CTGTGTACGC GCAGTGTCTC
GGACCGGCTG TGGCCTGGCT TCCACAGCAC CCTGACAATC CCACTTGGAG CACCTGGCTG
ACCACCTGGA TGCTCAACGA CACCGGGTTG CCGTCGGCCG ATCAGGCCAA CCCCACCGTC
GTGGACGGTC GGCCGATCTC GGACTGGAAC ACCGCGCACA ACATCTTCGA CACCTTCTTC
GTGGAGAACC ACGGCTCCTT CGAGCCGCAC TACCAACTCG AGACCTGGCG CATGTCCGCG
CGAGTGGCCG CGCATTTCCT GGCCGCGGGC CGGCAGATCC CGGCCGCTGC CGGGGCGGCC
AAGCCGAACG CCGCGCAGCT GTGGCGCACC ATCCGGCATG TGCAAAGCGA CAGCGGCGAG
CCGTTCATGC CGATGAATCC CGACCGATAC CACCTCTTCG GTCGCGACGT GCTGCCGCTG
GCGTTCCTGG CGCAGGTCAT GGGCGATCCG CTGGCGGCGC GTGCCGAAGC GAACATGGCC
GCGCAGCTCG GGCCGTACCA GCTTTATCCG CCGGAGTATC AGCTCACGAA GTTCAGCGGG
GAGGCGAAGT ACGAGCCGGA GGCGCGGGCC GAGCTGGCGA TCAGTTACCT GTTTCATGTG
TGGCGTGCGC AGCAGGGGGC GCCGGTTCGG CCGGTCACGG GGGAGCAGTT CGTCGCTTCG
GCGTCTGGCG CTACCGACTA TGGCGCCGTC CCCGGGTTGC TCGTGCACAA TACGGCGAAC
GCGTTCGCTG CGACCGTTTC CAAGCCGGGG TATGTGAAGT TCTGCTACGC GCCCAACCAT
GACGACTGGC TGTTCGACCT CTCCGGCGCG GCGCCCTCGC TGCTGCCTGC GACCGGGGCG
ACGGTCACGA ACCGCTTCGC TGCCGCTTAC AGCACCTTGC GTGACGGGTA TGACGCGAGC
GCTTCGCTGT TGACGTTGGC GAGTGGGTAC GCGGGATATG CGACGCTTCC CGATGGCGGC
GTGGTGTACG CGACCAGCGG GAACGGTGCC GGGGAAGGTG TGCTGAATGT GTTCAACCTG
GCGATGCCTG GCATCGCGGG GCTGGACGGG AGCCGGACTT ACGCCGGTGC CGGCGGCGCT
TTCACCGTCT CGGCTGGCGA TGTGCAGACC GGCGGCACTA ACGATCTGTC CTTCAGCGCG
GTGACGGCGC GGTACGTCCG GATGCTCGGT ATCAGGCCTG CTACACAGTA TGGCTACTCG
ATCTACGAGC TTCAGGTCTA CGCGCCTGGC GGCACGACCA ACCTGGCGCA GGGTAAGGCC
ACGACTGCTT CGTCCTTCAC GCCTGCCTAT CCGCCGCCCG CTGCCACCGA TGGCAATCCG
GCCACGCGGT GGGCGGTCGC CGTCGCCAGC CGATCGGTGC CGGACAGCTG GCTGCAGGTT
GACCTGGGAG CCGCCACGCA GATCGACCGC GTGTCCATCG CCTGGGAAGC TGCTTACGGC
GCGGCCTTCG CTATCCAGAC CTCGGACGAC GGCAGCACCT GGAGCACCGC GGCGGCCTTG
CCTGTGCAGC ATCACGTAGA CGGCGGTTGG GTGAACGTCG ACGGCCGTGC GGGATTCGTC
GTGCGCGGCA GCCGCAATCC GCTGACCGTG ATCGGGAACA CGCTCACCCT GTCCGACGGG
CCGGCGACCG GCGCCGCCGG GATGGTCGTG GAGGGCTATC CCGCGCAGAC GCCGCAGGGC
ACCGCAGCCA TGGCGGCCTT GCCGACGCCG ACGCCGACGC CGACGCCGAA CAGCACTGTC
GCAGGGCTCG CGGCGAGTAT CGCCGGGTCG CACCTGAGCC TGTTCAACCT CAGCGGACAG
AACATCGGTA CCGAATCAGC GCCGGCCGAG CTGAGCGTTC CAGCTTCGGG GCGTGCGCGG
CTGCTGTACC GCGGCCTACA GACCACCACC GCCACCGGGA CGGTCTACGA CGTCGTACTC
GCCGCCGCGA CCGCGCGCGT CGAACCCCCG CGCTTCACGC TGACCGGGAC CATTCCCGCA
GGCGTCGTAG CAGAGGTAGC GGACTCCCTG CACCTCACGC TCACAGCGCC CCCGACGAGC
GGCTGCACCC TGACCGTCGT CTCCCGCTCC AACGCCACAA CCCGAACCAT CTCCCTGCGA
GCCGGCCAGC AGAAACAGCT GACCTTCCCC GGAACCCTCA CCCCAACCCC CGACCTGGCC
CTGGGCCGCA CCACCTACCC CACCTCACCC CTACCGGCCG GCATGTCCGA CCCCGCCTCC
GCCGTAGACG GCAACCCCCA CACCGCCTGG ACCCCCGGCA CCCCCACCGC CCGCATGGTC
ATCGACCTCG GCACCCCCAC GCCCCTGGCA ACCCTGACCA CCCACTGGAC CACCCCCCAC
ATCCCCCCAT TCGCCATATC AGCATCCGCC GACGGCCAGC ACTACACCCC CCTCACCACC
AGCAACCCCC ACCACCCCGA CCAACCCCTC CCCATCAACA CAACCACCCG CTACCTAGCC
CTCACCCTCC AGAACTGGTC GCCCGCCCAC GCCAGCCTGA CCGCACTTTC GCTCACGTCC
TGA
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| Protein sequence | MRNGLTRRQF MNGIGGAALA TTVFSSGAAF AADGAGTGTE RAPAPATPAP DDTVAAAYYQ
YLLRHTNWAQ QKWDATAGHY AASDYNFAVV LGNAVLLTHG TYDASVAGVD AATLKTQTLA
TIDHFAASNV LNGGTEWGET MFFDSTFELY FILAAKLLWN DLDAATQTLI DKMTAAQAAY
TTALGSGNDP RSGSWSPNGL AGGWEGDTKV DEMAVYAQCL GPAVAWLPQH PDNPTWSTWL
TTWMLNDTGL PSADQANPTV VDGRPISDWN TAHNIFDTFF VENHGSFEPH YQLETWRMSA
RVAAHFLAAG RQIPAAAGAA KPNAAQLWRT IRHVQSDSGE PFMPMNPDRY HLFGRDVLPL
AFLAQVMGDP LAARAEANMA AQLGPYQLYP PEYQLTKFSG EAKYEPEARA ELAISYLFHV
WRAQQGAPVR PVTGEQFVAS ASGATDYGAV PGLLVHNTAN AFAATVSKPG YVKFCYAPNH
DDWLFDLSGA APSLLPATGA TVTNRFAAAY STLRDGYDAS ASLLTLASGY AGYATLPDGG
VVYATSGNGA GEGVLNVFNL AMPGIAGLDG SRTYAGAGGA FTVSAGDVQT GGTNDLSFSA
VTARYVRMLG IRPATQYGYS IYELQVYAPG GTTNLAQGKA TTASSFTPAY PPPAATDGNP
ATRWAVAVAS RSVPDSWLQV DLGAATQIDR VSIAWEAAYG AAFAIQTSDD GSTWSTAAAL
PVQHHVDGGW VNVDGRAGFV VRGSRNPLTV IGNTLTLSDG PATGAAGMVV EGYPAQTPQG
TAAMAALPTP TPTPTPNSTV AGLAASIAGS HLSLFNLSGQ NIGTESAPAE LSVPASGRAR
LLYRGLQTTT ATGTVYDVVL AAATARVEPP RFTLTGTIPA GVVAEVADSL HLTLTAPPTS
GCTLTVVSRS NATTRTISLR AGQQKQLTFP GTLTPTPDLA LGRTTYPTSP LPAGMSDPAS
AVDGNPHTAW TPGTPTARMV IDLGTPTPLA TLTTHWTTPH IPPFAISASA DGQHYTPLTT
SNPHHPDQPL PINTTTRYLA LTLQNWSPAH ASLTALSLTS
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