Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4970 |
Symbol | |
ID | 8336324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5682962 |
End bp | 5683948 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644958069 |
Product | Rieske (2Fe-2S) domain protein |
Protein accession | YP_003115671 |
Protein GI | 256394107 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.22227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.214971 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGTG AGGTGACCGG CGCGAGTGCC GAACCACATC AGCACCCGTG GGGCTGGTAT CCCGTCGCGT TCAGCCGTGA AGTGACGTCC GGCAAGGTCA TCAGCCGGAA GTTCGCCGAG TCCGAGATCG TCATCTACCG GACCGAGACC GGCCGGGCCC ACATCGTCAG CCCCTACTGC CCGCATCTGG GTGCTCACAT GGGCGGCGCC CGCGTCGACC GCGAGTTGCT GGTGTGCCCC TTCCACGCTT TCGCCTTCGC GCCCGACGGC CGCTGTGTCC GCACCGGATA CGGCACGCCG CCACCCCGCG GCGCACAGCT CACCTCGACG CCGGTCCGCG AAAGGAACGG TTTCATCTTC GCCTGGCACC ATCAGAACGG GTCCCCGCCG TCCTGGGAGG TCGAGCCGTT CGACTTCAGC GGATGCGGCC GAGGCGCGGT CTGGTCTCGC ACGTTCCAGG GAAACCAGAT CGACTTCCTG GAGAACACCG CGGACATCGG GCACTTCTCC ACCCTGCACC ACGTCCAGGC GACGCTCGTG GGCACGCCGC GCATGGACGG CCACCGCTAC GCCACCGACA TCGACCTGTC CGGCTTCTAT CGCAGCGAGC TGGTCACCCA CGCCCACGTG GAAGTGTTCG GCCTCGGATA CGTCACCGTG CGCTTCGACA TGCCGAAGCT CGGCATCAGC GCCATCGAGT TCGCCGGACT CACTCCGGAA GGCGGCGGCG CCATGACGCT GCGTCGCATC ACCCACGGAC GCCTCGCCGG CACTCGACTG CCGCGCGCGG CAGCCTGGGC CCGGCGTCCG GCCTCCGATC TCCTGGGCTT CGCGCTGAAG GTGGCGGGCA ACTCTCAGGT CACGGCCGAT GTGCGCATGT GGAGTCGCCG TGTCGTCACC GAGACTCCCA AGCTCGCCCA AGGCGACGGT CCCATCGCCC CCGCCCGCCG CTGGGCTCAG CGGTTCTACC AGGAACAGGA AGCGTGA
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Protein sequence | MTREVTGASA EPHQHPWGWY PVAFSREVTS GKVISRKFAE SEIVIYRTET GRAHIVSPYC PHLGAHMGGA RVDRELLVCP FHAFAFAPDG RCVRTGYGTP PPRGAQLTST PVRERNGFIF AWHHQNGSPP SWEVEPFDFS GCGRGAVWSR TFQGNQIDFL ENTADIGHFS TLHHVQATLV GTPRMDGHRY ATDIDLSGFY RSELVTHAHV EVFGLGYVTV RFDMPKLGIS AIEFAGLTPE GGGAMTLRRI THGRLAGTRL PRAAAWARRP ASDLLGFALK VAGNSQVTAD VRMWSRRVVT ETPKLAQGDG PIAPARRWAQ RFYQEQEA
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