Gene Caci_4846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4846 
Symbol 
ID8336200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5516558 
End bp5517049 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content72% 
IMG OID644957946 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_003115548 
Protein GI256393984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0382463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCTC AAGGGCGATC TGAACAGGTA TCCCCGCAGG TCGGGGCCCT GGCCGAGACG 
GTGATGATCC AGGTGCCGGC CGATCCCGAC TACCTGCCCG TGATCCGGTC GGCCAGCGCG
CACCTGGCGA CCAGACTCGG CTGCACCCTG CCGGAGGTCG CCGACGTGCG TCTGGCGGTG
GACGAGGCAG GTGGCCTGTT GCTGCGCCAC ACGGTCCGGG AGCTGCGGAC CGCCGATGGA
GCCGCAGCCG CCGACGGCGC CACCGATGCA GCGGCCACCG ATGCCCCCGA CGGAGACCTG
GAGTGCCGCT TCGTCCTCGA CGGTTCGGCG CTCCAGGTGG TGCTCAGCCG CCAGGCCCGC
GACGTCGTCG CGCCGCGGAA GGACGACTTC GGCTGGACCA TCCTGTCCGC GCTGGTGGAC
GACATCGTCT GGCGCGTCGA GGGTACGGCG GTGCGGGTGG AGATCCTGAA GCGCCGCGCG
GGCGGCGGTT GA
 
Protein sequence
MDPQGRSEQV SPQVGALAET VMIQVPADPD YLPVIRSASA HLATRLGCTL PEVADVRLAV 
DEAGGLLLRH TVRELRTADG AAAADGATDA AATDAPDGDL ECRFVLDGSA LQVVLSRQAR
DVVAPRKDDF GWTILSALVD DIVWRVEGTA VRVEILKRRA GGG