Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4652 |
Symbol | |
ID | 8336006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5292901 |
End bp | 5294169 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644957752 |
Product | ROK family protein |
Protein accession | YP_003115354 |
Protein GI | 256393790 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.219121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACTCGA CTGCCGGCGA CACGCAGGCC GCGCCCCAAA CCCCGATCAA CCTGCACAAC CTGGGGCGGG TCCGCATCCT GCAAGCCCTC ACCAGCCACG CCCGGCTCTC CCGCGCCGAC CTGGTGCGGC ACACCGGACT GGCCCGCACC ACCGTCAGCT CCGTCATCTT CGACCTGATC TCCGCGGGCC TGGTCCGCGA GAGTCCCGAC GTCCGCGAGA ATTCCGACAC CGCCGCCGCC GCCGCCGCCG GCGCCGCGCC CGGCCAGCGC ACCGGCCGCC CGCCGCTCCT GCTGCGCCTG GAACCGGAGG CCGCCTACGC CGTCGGCCTG GACGTCGGCC ACGATCACGT CCGCGCCATT GTGACCGATG TCGTCGGAAC GCCCCGCTGG GACCGCACCG AGGCCCTGGC CGTCGACGAC GACCCGCGGC GCGCGCTGGA CACCGCCGTG CGCCTCATCG CCGAAGCCGT CAAGGACACC GCGGTCCCGC CACACAAGAT CCTCGGGCTG GGGTTGGGCA TCGCCTGCCC CGTGGACAAA ACCACCGGCG GCTTGCACGC CGAGGGCATC ATGCCCGGCT GGGTCGGCAC CCGGCCCGCC GACGACCTGG CAGAGCGCAC CGGACTGCCG ACGCAGATCA TCAACGACGC CAACGCCGGC GTCCTGGCAG AGCGCCGCTT CGGCGCCGCG CGGGAGGCCA CCAACGTCGT CTACGTCCGC CTCGCCGCCG GTATCGGCGC CGGCATGATG AGCGAAGGCC GCATGCTCCT GGGCCACCAC GGCCTCGCCG GCGAGCTCGG GCATGTGATG GTCGAGCTGA ACGGCGCGGT GTGCCGCTGC GGCAGCCGCG GCTGTTTGGA AACCGTCGCC AGCCCCGCGG CGATCGCCGG GTTGTTGGCG CGCAGCTGGG GACAGCCGGC CGACAGCATC GACCTGCCGG AGCTGCTGCG CCGAGGCGAC CGCGGCGCGC TGCGCGTTGT CGAGGACGCC GGGGAAGCGG TCGGCCGCGC CCTGTCCGCG GCGGTACAGC TGCTCAACCC GCAGCTGGTC GTCATCGGCG GCGATCTGGC CGAGGCCGGT GAGGCGCTGC TGGAGCCGAT CCGCAGGACT CTGCGCCGCG GCACCATGGG ATCGCTGAAT CAGCGGCTGC GGATCGTGCC GAGCACCCTC GGCGACAGCG CGGGCGTACG CGGCGCGGCA GCGCTGGTGC TGGACAGCGT GCCGCAGCGC CTCGCGCTGG ACCTCCCGGC TCGCGGGGAT CTCAGGTAG
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Protein sequence | MHSTAGDTQA APQTPINLHN LGRVRILQAL TSHARLSRAD LVRHTGLART TVSSVIFDLI SAGLVRESPD VRENSDTAAA AAAGAAPGQR TGRPPLLLRL EPEAAYAVGL DVGHDHVRAI VTDVVGTPRW DRTEALAVDD DPRRALDTAV RLIAEAVKDT AVPPHKILGL GLGIACPVDK TTGGLHAEGI MPGWVGTRPA DDLAERTGLP TQIINDANAG VLAERRFGAA REATNVVYVR LAAGIGAGMM SEGRMLLGHH GLAGELGHVM VELNGAVCRC GSRGCLETVA SPAAIAGLLA RSWGQPADSI DLPELLRRGD RGALRVVEDA GEAVGRALSA AVQLLNPQLV VIGGDLAEAG EALLEPIRRT LRRGTMGSLN QRLRIVPSTL GDSAGVRGAA ALVLDSVPQR LALDLPARGD LR
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