| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4593 |
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| Symbol | |
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| ID | 8335947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5225179 |
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| End bp | 5225988 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957694 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_003115296 |
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| Protein GI | 256393732 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00530725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00160562 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATGTC ATAAACCCGG GCACCGTGCT CGCGCACGGT GCGTTTCCGC ACTGCTGGCA
GCCGGTGCGC TGCTGGCCGC CGCCGCCGAT CACCTCGGCG GTACCTCGGA GCGTCCTGCG
GTCCATACCG CGGCGCTCGG CATACCCTCG GCGCTGAGCA CGGCGTCCAT ACCGGCGCTG
CTGACCGGGG TGCAGGCACC GGCGCCGGTG GCGCGGCGTG TCCAGCCGGC CAAGACCGTG
CGGAAGACGG CCAAGACGAC TAAGCCCACC AAGACCATCA AGTCCAGCAA GGCCACCAAG
ACCGTCAAGA CCGTCAAGAC CAGCAAGACC CCCGCCCAGC ACAAGAGCGC GTCGAGGCCC
GCGTCCAACT CCAAGCCCCG CTCGAACTCG CGCTCGCGCC CCGCGCCGGT CCGCCACACC
AACTCCTACC TGCTGGCGCA CCTGCCCCCG GCGAAGAACA AGAAGGCAGC CGCCGCCGTC
CACGAGGCGC TCGCCCTCAT CGGCGTCCCC TACCGCTGGG GCGGCACCAC GCGCGCCGGC
TTCGACTGCT CGGGCTTCAC CCAGCACGTC TGGGGCGTCG CCGGCGTCAA GATCCCGCGT
ACCGTGCGCG CGCAGGCCAA GGCCGGCACC CACATCTCGC TGAACAAGGC CGAGCCCGGC
GACCTCGTGG TCTTCTATCC GGCGCAGCAC CACGTCGGCA TCTACGTCGG CAACGGTCTG
GTGATCGACT CGCCGCACAC CGGCGCCAAG GTCCGCCCCG ATCCGGTGCG CTCCATGCCG
GTCTCGGTCG TGGTCCGGGT CAAGGTCTGA
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| Protein sequence | MQCHKPGHRA RARCVSALLA AGALLAAAAD HLGGTSERPA VHTAALGIPS ALSTASIPAL
LTGVQAPAPV ARRVQPAKTV RKTAKTTKPT KTIKSSKATK TVKTVKTSKT PAQHKSASRP
ASNSKPRSNS RSRPAPVRHT NSYLLAHLPP AKNKKAAAAV HEALALIGVP YRWGGTTRAG
FDCSGFTQHV WGVAGVKIPR TVRAQAKAGT HISLNKAEPG DLVVFYPAQH HVGIYVGNGL
VIDSPHTGAK VRPDPVRSMP VSVVVRVKV
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