Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4504 |
Symbol | |
ID | 8335858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5130100 |
End bp | 5131146 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644957606 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_003115208 |
Protein GI | 256393644 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCCT CGACTACACC GACGGCGCGC GCCGACCATA GCCGAGTGAC CTCCCCGATT CCCCACCGCA CCGATCACCG CACGGACCTC GCACTACTAC TCGTGGCTTT CGTCTGGGGC TCCAGCTACC TCGCCGCGAA GTCCGCTGCC GCCGCGACGT CAGTCCTGGC GGTACTGCTG GCGCGATACG CCCTGTCGGC GATATCCGGC TCCGCGCTAC TGGCCGCGAG GCGCCAGCTG CGTCCACATC GCACGGAATT GCGCATCGGC ACGATCCTCG GACTGACCCA AGCCAGTGTC CTGATCATCG AAACCTACGG CGTCGCCCAC ACTTCCGCCG CCAACGCCGG GCTCATCATC AGCCTGACGA TCATCCTCAC GCCCTTGCTC GACCGTCGTG GCGCGGCACT GCCGGCGCGC TACTTCGCAG CATCGGGACT GTGTGTCGTC GCGGTCGGAC TGCTGATGAG CGGCAGCGGA GGCCTGCACA TGCCGAGCGC CGGAGACCTG CTCATGCTCG CCGCCGCAGT CGTGCGAGCC GGGCATGTCG CGCTGGTCGG ACGCCTGACC GCGACCAGCG ACATCAGGCC GCTGAATCTG ACCGTCGTCC AGACCTACGT CGGGACAGCG CTGTTCGCCA TCCCCGCCGC CACCGAGCTG CCGAAACTGG CACGCGCCGG AGCGAGCACG TGGGCTGAGA TGGCCTATCT GGCCCTGTTC TGCAGCGTAT TCGCGTTCGT GGCGCAGACC TGGGCAGTGC GCCGCACCTC GGCCAGCCGC GCCAGCCTCC TGCTGGGAAC CGAGCCCGTG TGGGCCGTCG CGGCGGGCGT GGCGCTCGGC GGAGAGCACC TGGCGGCGCC GGCCGTCGCC GGAGCCGCCC TGATGCTCGC CGGAACGTAC TGGGGTCAGG CGATCGAGCG TGCGCACCGG GCCCGCGTCG CCCTGAGCCT CAGCCTCGCA TGGCCGACAG CGCCGAGGCC GTCAGCTCCA CCGGATGCCC GCTCACCGGC ATCAGGCATT CCTGCGGGCT GCACGCCGCG TAGCTGA
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Protein sequence | MTSSTTPTAR ADHSRVTSPI PHRTDHRTDL ALLLVAFVWG SSYLAAKSAA AATSVLAVLL ARYALSAISG SALLAARRQL RPHRTELRIG TILGLTQASV LIIETYGVAH TSAANAGLII SLTIILTPLL DRRGAALPAR YFAASGLCVV AVGLLMSGSG GLHMPSAGDL LMLAAAVVRA GHVALVGRLT ATSDIRPLNL TVVQTYVGTA LFAIPAATEL PKLARAGAST WAEMAYLALF CSVFAFVAQT WAVRRTSASR ASLLLGTEPV WAVAAGVALG GEHLAAPAVA GAALMLAGTY WGQAIERAHR ARVALSLSLA WPTAPRPSAP PDARSPASGI PAGCTPRS
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