| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4458 |
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| Symbol | |
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| ID | 8335812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5073480 |
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| End bp | 5075948 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644957560 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003115162 |
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| Protein GI | 256393598 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGAAGG GCATCGCCTT CGGGGTCGCC GCCGCGCTGG CGGTGGCGGC CATGGTGCTC
GGCGCCTTCG GGGTGCTGAT CGAGTCCGGC GCGCGGGCGC ACGGCACGCT GGAGCGCTAC
GCCTCGGCCG CCGCGGTCGT CCACGGCGAG CAGAGCGCGA CGTACTCCCA CGGCAGCGGG
GACAACAAGG ATTCCGAGAG CCGGCCGCTC GTCGAGCCGG CCCGGGTGCC GCTGGCACAG
GCCGCGCCGC TGAAGGCGGT GGCCGGGGTC GGGAATGTGG TCGCGGACTT CTCGGTGCCG
GTGGTCGCTG CCGCAGCGTC TGGCTCACCT GGTTCGCCCG GCTCCACGCT GACCGGTCAC
GGCTGGGACT CCTCGAAGCT GGTCCCGACC GCTTTGTCCT CCGGGCATGC CCCGGTTTCA
GCGCACGATG TCGTGGTTGA TGCGGGTTCT GCGACCCGGC TCGGCGCCCA CGTCGGCGCA
GACGTCCGAC TCCAGATCGA CGGCGCGCCG CAGGACTACC GCGTGGCGGG GATCAGCTCC
ACCGGTCCGT CGGCGACGGT GTACTTCACG CAGCAGCAGG CTGAGACGCT GTCCGGCCAT
CCGGACCGTG CCGACGCGCT GGTCGTGCTG CCCTCCGCCG GCGCGCACGT CTTCGCCTCC
GCGCTGCGCC ACGCCGCACC CGGACTGGAC GTCGCGACCG GCGCGGCGCG CGGCGACGTG
GAGAACCCGG CGATCCAGGC CGGCCGCACC GACAACCTGG GCGCCGCCGG CAGCCTCGGC
GGCGCCGGTC TGCTGGTGGC ATTGCTCGTT GTCTCCGGGC TCCTGGAGCT TTCGGTCCGC
GACCGCACCC GGGAGCTCGC GGTGATGCGG GCGGTCGGCG CCACGCCCCG ACAGGTGCGG
CGGGTCATCG TGCGGGAGAT GCTGAAGATC GCGGTGCCCT CGGCGCTGGT CGGGGGAGTG
GCCTCGCTCG GGCTCGGGGC GTTGCTGAAG GCCGTGATGA CGTCCCAAGG CGTGCTGCCC
TCAGGTTTCG CGCTGGCACT GAGCCCTATC CCGGTGTTCG GCTCGGCGCT GGTCACCGTG
CTCGCCGCTG TCGGCACCGG CTGGCTCGCC TCCCGGCGGG TGTCGAAGAT CAAGCCGGTG
CAGGCGCTCG GTGAGGCCGC CGTCGAGCCG ACCCGGCTGC CGCGCTGGCG GGTCATCATG
GGCTTGGTGT TCCTGGTGCT GGGCGCGGGG ATGCTGGTGC TGGCGTTCAC GGCCGGCGGG
CAGGCGGCGT CGTCCTCGAT CGCCGGGCTC GTGATCTCGC TGATGTGGGG CGTGGCGCTG
CTCGGACCGT GGATCGCGCG CGGCGGCGTC CGGGTGCTCG GCGCGCCGCT GCGCAGGCTT
TCGCCGATCG CCGGGGACCT GGCTGCCACG TCGGCGCGCG CCGCCGCCGT GCGGATGGCC
GCTGTCATCA CGCCGATCGC GTTGGCGCTG TCCTTCGGCG GCACGCAGCT GTTCGCGCAG
ACCACGAGCG CGAACGCCAC CTCGGCTGAG GCGCGCGAGG GCATGCACGC CGACCGCGTG
CTGACCTCCT CAGGGCCCGG AGTCCCGCAC GCCGTCTACG ACGCGGCGAA GACGCTGCCG
GGCGTGACCG ACGTGACCGC GGTGAAGCGC ACCACGGTGG TGATGCCGGT GTGGAACCTC
GACACGTCGC TGCAATCGCT GTCGGCCCAA GGCTTGGAGG GCGGCTCGGC GACGACGCTG
GATCCGAAGG TCACGGCCGG ATCGCTCGCC GGGCTGAACG AGCCGGGCAC CATCGCGCTG
AGCTCGATGG TCGCGCACGA CACGAAGGTC GGCGACACGC GCCAACTGTG GTTGGGCGAC
GGCACGCAGG TGACGCTGAA GGTGGTCGCG CTGTACGACC ACGGGTTCGG CTTCGGGGAC
GTGCTGCTGC CGCGCGATCT GGTGGCGGCG CACGCCGCGA CCACGCTGGA CGACTACGTG
CTCGTCGACG GTCAGGGTGA CCTCAGCCCT CTGATGAAGC AGTTCACCGG GCTGCGCACC
GCGACCGCCG CCGACTATGG CAGCACCCTG ACCGAGCAGG CGCACCGCGA CGGTCTGATG
GGCTTGATCG CGGTGGTGGC GATCGCCGGC TTCATCCTGG TCGGGGTGGT GACCACGCTG
GCGGTGGCTA CGGCGTCGCG TCGCAGAGAG CTGACACTGC TGCGGCTGGT CGGCGCCACC
CGCGACCAGG TGCTGCGTGC GCTGCGACTG GAGACAGTGA TCATCCTCGG GGTCGGGACG
CTCGTCGGGG CGGCGGTCGC CGGGGTGACG CTGGTCGCCT TCGCCGCTGG CGTCACCGGC
TTGCCGATGC TCTCGATACC GCCGCTGACC TGCGCGGGGA TCGTGGCGGC GGTGGCGATT
CCGGGCGCGG CCGCGGTGCT GGTGCCGGGG CGGCGGATCG TGCGGCGGCG CTCGCCTCGG
ATCGAGTGA
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| Protein sequence | MRKGIAFGVA AALAVAAMVL GAFGVLIESG ARAHGTLERY ASAAAVVHGE QSATYSHGSG
DNKDSESRPL VEPARVPLAQ AAPLKAVAGV GNVVADFSVP VVAAAASGSP GSPGSTLTGH
GWDSSKLVPT ALSSGHAPVS AHDVVVDAGS ATRLGAHVGA DVRLQIDGAP QDYRVAGISS
TGPSATVYFT QQQAETLSGH PDRADALVVL PSAGAHVFAS ALRHAAPGLD VATGAARGDV
ENPAIQAGRT DNLGAAGSLG GAGLLVALLV VSGLLELSVR DRTRELAVMR AVGATPRQVR
RVIVREMLKI AVPSALVGGV ASLGLGALLK AVMTSQGVLP SGFALALSPI PVFGSALVTV
LAAVGTGWLA SRRVSKIKPV QALGEAAVEP TRLPRWRVIM GLVFLVLGAG MLVLAFTAGG
QAASSSIAGL VISLMWGVAL LGPWIARGGV RVLGAPLRRL SPIAGDLAAT SARAAAVRMA
AVITPIALAL SFGGTQLFAQ TTSANATSAE AREGMHADRV LTSSGPGVPH AVYDAAKTLP
GVTDVTAVKR TTVVMPVWNL DTSLQSLSAQ GLEGGSATTL DPKVTAGSLA GLNEPGTIAL
SSMVAHDTKV GDTRQLWLGD GTQVTLKVVA LYDHGFGFGD VLLPRDLVAA HAATTLDDYV
LVDGQGDLSP LMKQFTGLRT ATAADYGSTL TEQAHRDGLM GLIAVVAIAG FILVGVVTTL
AVATASRRRE LTLLRLVGAT RDQVLRALRL ETVIILGVGT LVGAAVAGVT LVAFAAGVTG
LPMLSIPPLT CAGIVAAVAI PGAAAVLVPG RRIVRRRSPR IE
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