Gene Caci_4369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4369 
Symbol 
ID8335723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4960560 
End bp4961678 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content72% 
IMG OID644957472 
ProductAldose 1-epimerase 
Protein accessionYP_003115074 
Protein GI256393510 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.449933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0127022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGATCTT CAGCCCTCCG ACCTTTCGGC ATCCTGCCCG ACGGCACCGC GGTCGACAGC 
TGGCGGCTGA CCGACTCCTC CGGAGCCCAG GCCACGATCC TCGCCTACGG CGCCACCCTG
CAGGAACTCA CGACGCCGGA TCGTGACGGT CGGATCGCCA ACGTCGTCCT CGGATTCTCC
GAGTTGTCGG ACTACATCGA GCGCGCCGCG TATTACGGCT GTGTCGTCGG ACGCTACGCC
AATCGGATAG CCGGCGGCAC CTTCGCCCTC GACGGCCGCG AGATCCGCCT GCCGCTCAAC
GACGGCCCGC GTCCCAACAC CCTGCACGGC GGCACGCCCG GCTTCGGCGC CCGCCTGTGG
ACCGCGCCGG ACGGCATCGT CGAGGTCGGC GACGCGAACG GTGCCGACGG TGCTGCCGGT
GCCGACGGCG CCGCTGGCAC CTCGCTCACC CTCACCCGCG TCAGCCCCGA CGGCGAGGAG
GGCTTCCCCG GCGAGCTCAC CGTCAGCATC CGCTACACCC TCGCCGCCGG CCGCCTCACC
CTGGACTACC GCGCCGAGAC CACCGCCCCG ACCGTGCTGA ACCTGTCCAA CCACGCCCGC
TTCAACCTCG CCGGCGAGGG CGTCGGCAAC GTCCTGGACC ACGAACTGAC CGTCGCCGCC
GACGGCTTCC TCCCGGTCGA CGAGGCGCTG ATCCCGCTCG ACGGCGCCGC CCCGGTCGCC
GGCACCCCCT TCGACTTCCG CACCCCGACC CCGGTCGGCG CGCGCCTGGC CGACCCGCAC
CCGCAGCTGG AAACCGTCGG CGGATACGAC CACTGCTTCG TCCTGCGCGG CGGACGCACA
GCGGTCCCGC GCCCCGTCGT CACGCTCCGC GACCCGGCCA GCGGCCGCAC GATGCAGATC
GCGACGACCG AACCGGGCCT GCAGCTCTAC CTCTCCTCCG AGCTCGACGG CACGCTGACC
GGCCTCGGCG GGCGCCCGTA TGAGCAATAC GGCGGCATCG TGCTGGAGAC CCAGCACTTT
CCCGACTCCC CGCACCGTCC CGACTACCCC TCGACAGTGC TCCTACCAGG GCGTTCCTTC
ACTTCGACGA CGGTCTACGC CTTCGGCGTC CGCACTTGA
 
Protein sequence
MRSSALRPFG ILPDGTAVDS WRLTDSSGAQ ATILAYGATL QELTTPDRDG RIANVVLGFS 
ELSDYIERAA YYGCVVGRYA NRIAGGTFAL DGREIRLPLN DGPRPNTLHG GTPGFGARLW
TAPDGIVEVG DANGADGAAG ADGAAGTSLT LTRVSPDGEE GFPGELTVSI RYTLAAGRLT
LDYRAETTAP TVLNLSNHAR FNLAGEGVGN VLDHELTVAA DGFLPVDEAL IPLDGAAPVA
GTPFDFRTPT PVGARLADPH PQLETVGGYD HCFVLRGGRT AVPRPVVTLR DPASGRTMQI
ATTEPGLQLY LSSELDGTLT GLGGRPYEQY GGIVLETQHF PDSPHRPDYP STVLLPGRSF
TSTTVYAFGV RT