| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4340 |
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| Symbol | |
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| ID | 8335694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4929497 |
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| End bp | 4930360 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644957443 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_003115045 |
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| Protein GI | 256393481 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.362809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC GGGAACAGGC CGTGACCCAG GAGGTGCTGG CCAGCTTCGC CGGGACCGCC
GATCCGCGGC TGCGCGAGAT CCTGGACGCC CTGGTGCGGC ACCTGCACGG CTTCGCCCGC
GACGTGCGGC TCACCCAACC GGAGTGGGAG GCGGCGATCG GCTTCCTCAC CCGCGCCGGG
CACATCACCG ACGACCGGCG GCAGGAGTTC ATCCTGCTGT CCGACGTGCT CGGGCTGTCG
ATGCTGACCG TCGCGATCAA CGAGCCGGAG ACGCCGGGCG CGACCGAGGC GACGGTGTTC
GGGCCGTTCT TCGTCGACGG CGCGCCGGAG GTGGAGCTCG GCGGGGATCT GGCACGGGGC
GCCGCCGGGA CGCCGTGCTA CGTGTCAGGG CGCGTACTGT CGGCCGACGG CAGCGCGCTG
GACGGCGCGC GCCTGGACGT CTGGGGCGCC GACGAGGACG GCTTCTACGA CGTGCAGTAC
TCCGGCGACC GCTCCGCAGG ACGCGGCTGG CTGCGCACCG CGCCCGACGG CGGCTTCCGC
TTCTGGACCG TCCTGCCCAC GCCGTACCCG ATCCCGCACG ACGGTCCCGT CGGCGATCTG
CTCACCGCCG CCGGACGCGG ACCGATGCGT CCGGCACACC TGCACTTCAA GGTCACCGCG
CCGGGGCACC GGACGTTGAT CACGCACATC TTCGTCGCGG GCGACCCGTA TCTGGACCGG
GATGCGGTGT TCGGGGTGAA GGACAGCCTC GTGGTGGATG CCGAGCATCA CCAGGACGGC
GAGGCGCCGG ACGGGACGCG GCGTGAGGGT GAGTGGACGA GCATGGCGTA CGACCTGGTG
CTGGTTCCCG ACGAGGCCGC CTGA
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| Protein sequence | MTDREQAVTQ EVLASFAGTA DPRLREILDA LVRHLHGFAR DVRLTQPEWE AAIGFLTRAG
HITDDRRQEF ILLSDVLGLS MLTVAINEPE TPGATEATVF GPFFVDGAPE VELGGDLARG
AAGTPCYVSG RVLSADGSAL DGARLDVWGA DEDGFYDVQY SGDRSAGRGW LRTAPDGGFR
FWTVLPTPYP IPHDGPVGDL LTAAGRGPMR PAHLHFKVTA PGHRTLITHI FVAGDPYLDR
DAVFGVKDSL VVDAEHHQDG EAPDGTRREG EWTSMAYDLV LVPDEAA
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