| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4335 |
|---|
| Symbol | |
|---|
| ID | 8335689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 4921960 |
|---|
| End bp | 4924725 |
|---|
| Gene Length | 2766 bp |
|---|
| Protein Length | 921 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644957438 |
|---|
| Product | phosphoesterase |
|---|
| Protein accession | YP_003115040 |
|---|
| Protein GI | 256393476 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3391] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.284385 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.290519 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTAA CGCGCCGCAA GGTGCAGAAG GCGAGCGCTT TCCAGCGCGC CGCCGGTCCG
TCCCGGCACC GCCTGTCCAA GGCGGCTGTC GTGGCCCTCG GTCTGGTCGT CACCAGTGCC
GGGGTCGGAT CGGCTTCCAC CCGGCAGCTC GGCCACCAGC AGGTCGGCCA GCTGACCAAC
AAGGGCGAGG TCATCGCCAG CGACCAGTAC ATCAACCCGA TCGGCTCGCG CCTGGTGGTG
AACCAGGGCA AGATCATGGG CGCCACCGTG AGCCCGGACG GCACGCACGT GGCCGCCACG
ATCACCGACG GCACCGGCGC GATGGTCATC ATCGACCTGC GCAGCTACCA GGTGCAGCAG
GTGATCGGCA AGGCCGCCAC CGGCGTGAAC CTGGCGATCA GCGGAAACGA CGTCGGGCAG
ACCTCGCCGA CGTACTCTCC CGACGGCAAG TCGGTGTGGG TGGGCCGGGC CAACGGCTAC
ACCAAGTTCA CCGTGAAGCC CGACGGCACG CTGGCCACCC CGGTCGACGT CGCGATCCCG
GCGGCCGGCT CGGCGCAGGC GCTGTCCGGC AAGGCGGTCT TCTCCGCCGA CGGCGCGACG
GTGTACGGGG CGGTCAACGG CCAGAACCGG GTCGTGGCGA TGGACGCCGC CACCGGCGCG
ATCACCCAGA GCTGGACCAC CGGCATCGCG CCGCGCGGCA TGGCGCTGGT CAACGGCAAG
CTGTACGTGA GCAACGAGGG CGGCCGCACC GCCGTCGCCG GCGACACGAC GATGAACTCC
TACGGCACCG CGGTGCCGGC GAACCCGGAG ACCGGCGCCT CGACGACCGG CACGGTCAGC
GTCATCGACA CCGTGAACCC CACGGTGCCG GTCGGCAGCA TCACCGTCGG CACGCACCCG
ACCGCCGTCT ACGCCTCGGG CGCCACGGTC TTCGTGGCGA ACACCGCCGC GAACTCCGTC
TCGGTCATCG ACACCGCCAA GAACAAGGTG GTCCAGACGA TCGCGACCCA GCCCTGGACC
GAGGCCTCGG TCGGCTACGA GCCCGACGCG ATCTCCCTGA CCCCCGACGG CCACCTGCTG
GTCAGCCTGG GCCGGGCGAA CGCGGTCGCG GTGTACCGCT TCAAGTCCGC GCAGCAGCCG
GTCAGCTACG TCGGCCTGCT GCCGACCGAC TACTTCCCGG CCGAGGTGGC CACGGTCGGC
AACCAGATCG TGGTGGCCAA CACCCGCGGC GTGGACGCCC TGCGCCCGAC CGTCGCCGCC
GGCCACGGCA CCCACGACAC CACCAGCAGC CTGACCCGCT TCAAGCTGCC GACCGACCAG
CAGATCCGGG ACTACACCGG CAAGGTCTTC CAGTACAACG GCTGGACGCC CGATTCGGTG
AAGGTGGCCT CCAAGCCCAA CCAGCAGGCG AAGAAGGCGG TCCCGATCCC GGCGCAGATC
GGCGACCCCT CGACGATCAA GCACGTGTTC CTGATCGTCA AGGAGAACCG GACCTACGAC
CAGGTCTACG GCGACATGCC GCAGGGCAAC GGCGACTCGA CGCTGACGCA GTACGGCGAG
GCTGTCACGC CGAACCAGCA CGCCCTGGCC GAGCAGTTCG GTCTGTACGA CAACTTCTAC
GACGTCGGCA CGAACTCCGC CGAGGGCCAC AACTGGCTGA TGCAGTCGGA CGACCCGGAG
TACACCGAGT CCTCGGCCGG TGAGTACACC CGTAGCTACG ACACGGAGAA CGACGTCCTG
GGCCACCAGG AGTCGGGCTT CATCTGGACC GGCGCGAAGG CGGCGGGCAA GAGCGTCAAG
GACTACGGCG AGTTCCAGTC GATCGAGAAC AAGCCGGCCG GCGCGACCTG GCAGGACTAC
TACTGCGACG CGCAGACCAT GTCCGCCACC GGCGCCCCGA GCCAGTACCC GATCCAGACC
GGCTCGGCGA TCCCGTCGCT GAACGACGTC TCGGTCCCCG GCTTCCCGCT GTTCGACCTC
TCGGTCCCGG ACGTGTACAA GGCGCAGGTC TGGAAGCAGG ACTTCGAGAA GAACGGCCCG
GCCAACCTGA ACATGTTCTG GCTCTCCGAC GACCACACCG GCGGACCGCC GAGCCCGGCC
GCCGAGGTCG CCGACAACGA CCTCGCGGTC GGCCAGATCG TCGACACCAT CTCGCACAGC
CCGTACTGGA AGGACTCGGC CATCTTCGTG GTCGAGGACG ACTCCCAGGC CGGTCTGGAC
CACGTCGACG GCCACCGCGC CCCGGTCCAG GTCATCAGCC CCTACGCCAA CCACGGCACC
GTGGACTCCA CCTACTACTC GCAGATCATG ATGGTCCGCA CCATCGAGCA GATCCTCGGC
ATCAAGCCCA TGAACCAGCT CGACTCCGCG GCCACCCCGA TGACCTCGGC CTTCACCACC
AAGCCGAACC TCACCCCCTT CACCACCGTG CCGAACCAGA CCTCGCTGAC CCTGGGCCTG
CCCACCCAGC CGGCCTGCGG CGCCAACGTC CCGGCGGGCC AGACCACCGC CTCCGTCGCC
AAGGCCAGCG CCGCCGCCAC CGCGGTCCCG GCCTCGGAGA CCGCGGTCGC CGCCCAGTGG
AAGTCCTGGG CCGCCCTGCA GCACCTGACC GGCCCGAACG CGATGCCGGA CTTCGCCAAC
CCCCAGCTGA TGAACCGGTA CACGTACTAC CAGAACAACG GCTGGACCAA GGCTTACCCG
GGCGACAAGA AGATCCTCGC GCCGAACGAT GTTCCGGGTG CCTTCCTGCC GGGTTCGGCT
GACTAG
|
|---|
| Protein sequence | MQVTRRKVQK ASAFQRAAGP SRHRLSKAAV VALGLVVTSA GVGSASTRQL GHQQVGQLTN
KGEVIASDQY INPIGSRLVV NQGKIMGATV SPDGTHVAAT ITDGTGAMVI IDLRSYQVQQ
VIGKAATGVN LAISGNDVGQ TSPTYSPDGK SVWVGRANGY TKFTVKPDGT LATPVDVAIP
AAGSAQALSG KAVFSADGAT VYGAVNGQNR VVAMDAATGA ITQSWTTGIA PRGMALVNGK
LYVSNEGGRT AVAGDTTMNS YGTAVPANPE TGASTTGTVS VIDTVNPTVP VGSITVGTHP
TAVYASGATV FVANTAANSV SVIDTAKNKV VQTIATQPWT EASVGYEPDA ISLTPDGHLL
VSLGRANAVA VYRFKSAQQP VSYVGLLPTD YFPAEVATVG NQIVVANTRG VDALRPTVAA
GHGTHDTTSS LTRFKLPTDQ QIRDYTGKVF QYNGWTPDSV KVASKPNQQA KKAVPIPAQI
GDPSTIKHVF LIVKENRTYD QVYGDMPQGN GDSTLTQYGE AVTPNQHALA EQFGLYDNFY
DVGTNSAEGH NWLMQSDDPE YTESSAGEYT RSYDTENDVL GHQESGFIWT GAKAAGKSVK
DYGEFQSIEN KPAGATWQDY YCDAQTMSAT GAPSQYPIQT GSAIPSLNDV SVPGFPLFDL
SVPDVYKAQV WKQDFEKNGP ANLNMFWLSD DHTGGPPSPA AEVADNDLAV GQIVDTISHS
PYWKDSAIFV VEDDSQAGLD HVDGHRAPVQ VISPYANHGT VDSTYYSQIM MVRTIEQILG
IKPMNQLDSA ATPMTSAFTT KPNLTPFTTV PNQTSLTLGL PTQPACGANV PAGQTTASVA
KASAAATAVP ASETAVAAQW KSWAALQHLT GPNAMPDFAN PQLMNRYTYY QNNGWTKAYP
GDKKILAPND VPGAFLPGSA D
|
|---|
| |