| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4317 |
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| Symbol | |
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| ID | 8335671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4900365 |
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| End bp | 4901879 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957420 |
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| Product | Alpha-N-arabinofuranosidase |
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| Protein accession | YP_003115022 |
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| Protein GI | 256393458 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.341945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00470977 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCTGACAG CACATGCCAC CCTCGACCCG GCCTTCCGCG TCGCGCCGGT CGACCGCCGC
CTGTTCGGTT CCTTCGTGGA GCACATGGGC CGCTGCGTCT ACGGCGGGAT CCACGAGCCC
GGACACCCCG AGTCCGACGC CGACGGAAAC CGGCTGGACG TCCTGGAACT CACCCGCGAC
CTCGGGATCA GCGTCATCCG CTACCCCGGC GGCAACTTCG TGTCCGGATA CCGCTGGGAG
GACGGCGTCG GGCCGGTCTC CGAGCGGCCG CGCCGGCAGG ACCTGGCCTG GCGCTCCATC
GAGACCAACG AGTTCGGCCT GAACGAGTTC ATGGCCTGGG CGAAGCTGGC GAACGTGGAG
CCGATGATGG CGGTGAACCT GGGGACCCGG GGCATCCAAG AGGCCTGCGA CCTGCTGGAG
TACGCCAACC ACCCGGGCGG CACGTACCTG TCCGACCTGC GCCGCAAGCA CGGCGTCGAG
GAGCCGCACG CGATCAAGCT GTGGTGCCTG GGCAACGAGA TGGACGGCCC GTGGCAGACC
GGCCACAAGA CCGCCGAGGA GTACGGCAGA CTCGCCGCCG AGACCGCCAA GGCGATGCGC
CAGGTCGACT CCGGCATCGA GCTGGTCGCC TGCGGCAGCT CCAACGCCCT CATGCCGACC
TTCGGCTCCT GGGAGTCCAC GGTCCTGGAG CACACCTTCG ACTACGTGGA CTACATCTCC
CTGCACGCCT ACTACGAGCA ACACGGCCAG GACCGCGCCA GCTTCCTGGC CGCCGCAGCC
GGCATGGACC GCTTCATCGA CGGCGTGGTG GCCACCGCCG ACCATGTCTC CGCGAAGAAG
AAGTCCCGCA AGAAGCTCAA CCTCTCCTTC GACGAGTGGA ACCTGTGGCA GGAAAGCCGC
TTCGCCGGCC ACACGAACCT GGACTGGGAA CAGGCGCCCC GACTGATCGA GGACACCTAC
ACCGTGCAGG ACGCGGTGGT CTTCGGCAGC CTGCTGATGT CCCTGCTCCG CCACGCCGAC
CGGGTCGCCA TCGCCTGCCT CGCGCAGCTG GTGAACGTGA TCGGCCCGAT CCGCGCCGAA
CCGGACCGCC CAGCCTGGGC ACAGACCATC TTCCACCCCT TCGCACTCAC CGCTCGGCAC
GCAGTCGGCG ACGTGCTCCG CGTGGAGACA GCCACCGACC TCTACGACAC CGCCGAGCAC
GGCGACGTAC CGCTGGTCGA CGTGGTGGCT ACGCACGACC GCGAAAGCGG GCAGCTCACG
GTGTTCGCGA TGAACCGGCA CACCGAGGAC CGGGCCCGCC TGGAGATCGA CCTGCGGGCT
TTCGGCGACC TGGTGGTCAC CGAGCACCTG CACCTCGGCG GCGAGCAGGA CCTCGACGCC
GTGAACTCGA TCGAGACGCC GCAGGCGGTC GCGCCGATCA GCGTTGAGGG CGCGAGCATC
GAGGGACGTC GGCTGACGGC TTCGCTCCCG CCGGTGTCCT GGAACATGAT CCGGTTCGTT
CCCGCCAATC GGTAG
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| Protein sequence | MLTAHATLDP AFRVAPVDRR LFGSFVEHMG RCVYGGIHEP GHPESDADGN RLDVLELTRD
LGISVIRYPG GNFVSGYRWE DGVGPVSERP RRQDLAWRSI ETNEFGLNEF MAWAKLANVE
PMMAVNLGTR GIQEACDLLE YANHPGGTYL SDLRRKHGVE EPHAIKLWCL GNEMDGPWQT
GHKTAEEYGR LAAETAKAMR QVDSGIELVA CGSSNALMPT FGSWESTVLE HTFDYVDYIS
LHAYYEQHGQ DRASFLAAAA GMDRFIDGVV ATADHVSAKK KSRKKLNLSF DEWNLWQESR
FAGHTNLDWE QAPRLIEDTY TVQDAVVFGS LLMSLLRHAD RVAIACLAQL VNVIGPIRAE
PDRPAWAQTI FHPFALTARH AVGDVLRVET ATDLYDTAEH GDVPLVDVVA THDRESGQLT
VFAMNRHTED RARLEIDLRA FGDLVVTEHL HLGGEQDLDA VNSIETPQAV APISVEGASI
EGRRLTASLP PVSWNMIRFV PANR
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