Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4263 |
Symbol | |
ID | 8335617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4839017 |
End bp | 4839757 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644957366 |
Product | hypothetical protein |
Protein accession | YP_003114968 |
Protein GI | 256393404 |
COG category | [S] Function unknown |
COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.579541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.123734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCCTG AGGTCCACTC CCTGACCGGT GCCTACGTGT GCCATGCGCT GGAGCCCGCC GAACGCGAGG CGTTCGAGCG TCATCTGGCC GAGTGCCCGA CCTGTGTGCA GGAAGTCGCC GAGCTGCAGG AGACCGCGGC GCTGCTGGCC TCCGCCGCCG CCGAGACCCC GCCGGCACGC CTGAAGGCGG CGGTCGACGC GCGGATCGCG GTCACCCGGC AGATCCCGCC GATCATCGAC CACACCCCGG CGCGGCAAGC CGCACCCCGG CCGCGGCGGC GCTGGTTCAC AGGGCTCGGC TATGGTCTGG CCGCCGGGAT GGCGGTGGTC GTCGCGGTGC TGGGCGTCCG GCTGAACGAC CAGCAGAATC AGATCGATCA GGCGCGCGAG CGCAGCACGA CGATCTCCGC GCTGCTCGCG GCGCCCGACG CGCACAGCGA CAGCGTGACC GTGAGTACCG GCGGCAGCGG CAGGGTTCTG GTTTCCCGGT CGCGCGACGA GGCCGCGATC ACGGTCAGCG GGCTCAGCCA GCTCTCGCCG GGCAAGGTGT ATCAGCTGTG GATGATGGGT CCTTCGGGAG CCCGCTCCGG CGGGTTGGTG CCGATCGGTT CCGAGGCCTT CGACTCGGTG CTGGCTCATG GGCTCGGCGA CGCGCAGACC ATCGGGCTGA CGGTCGAGCC GACCGGTGGT TCGGCGCAGC CGACGACCAC GCCGGTGATG CTGCTGCCGA TGCCCGCGTA G
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Protein sequence | MDPEVHSLTG AYVCHALEPA EREAFERHLA ECPTCVQEVA ELQETAALLA SAAAETPPAR LKAAVDARIA VTRQIPPIID HTPARQAAPR PRRRWFTGLG YGLAAGMAVV VAVLGVRLND QQNQIDQARE RSTTISALLA APDAHSDSVT VSTGGSGRVL VSRSRDEAAI TVSGLSQLSP GKVYQLWMMG PSGARSGGLV PIGSEAFDSV LAHGLGDAQT IGLTVEPTGG SAQPTTTPVM LLPMPA
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