Gene Caci_4262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4262 
Symbol 
ID8335616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4838486 
End bp4838920 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content73% 
IMG OID644957365 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003114967 
Protein GI256393403 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.388354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.116604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACTA TCGCACCTCC CCGGCTGGTC GACCGGTACC GCGCCGGGCA AGAGTCCGGC 
GAGCGCGGGG ACCTGTTCGA CGCCGACTGC CCGACCCGCC TGCTGCTGGA CCGGATCGGC
GACAAGTGGA CCGTCCTGGT CGTCCTGCTC CTGTCCGACG GCCCGATGCG CTTCACCGAA
CTGCGCACCC GCCTGGGCCG CGTCGCCCCG AAGGTGCTGA CCCAGTCGCT GCGGCGCATG
GAGCGCGACG GCCTGGTCAC CCGCCAGGTC TTCGCCGAGG TCCCGCCGCG CGTGGAGTAC
ACGCTCACCG AGCTGGGGCA CTCCCTGGCC GAGCCGATCG CGGTGATCGG CGACTGGGCC
GAGGTCAACA TGCCCCGGCT CACCGCGGCG CAGCAGGCGT ACGACGCCGC GCACGCGACC
GACGGCGACC GCTGA
 
Protein sequence
MVTIAPPRLV DRYRAGQESG ERGDLFDADC PTRLLLDRIG DKWTVLVVLL LSDGPMRFTE 
LRTRLGRVAP KVLTQSLRRM ERDGLVTRQV FAEVPPRVEY TLTELGHSLA EPIAVIGDWA
EVNMPRLTAA QQAYDAAHAT DGDR