Gene Caci_4233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4233 
Symbol 
ID8335587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp4801264 
End bp4801866 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content70% 
IMG OID644957336 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003114938 
Protein GI256393374 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0221768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.231095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGCA CGTACACCTC GCCTGTCAGG GCCGCGGGGG CCCGGGAGAC CCACGCCGCG 
ATCCTGAGAG CCGCGGAGAG CCTGTTCGTG GAGCGGGGTT ACGTGCAGAC CACGGTCGCC 
GGCATCGCCG AGCGCGCCGG CGTCGCCTTG AACACCGTCT ACACCAGCGT CGGCGGCAAG 
CCGGCGATCG TGGAGGCGCT GGCGGTCGAG GGCACGGAGG ACGAGGGGAT CCAGGCCTCG 
TTGGCCGCCG TCCACGTCGC GACCGAACCC AGGGAAGTCC TGCGGCTGAC GGCCGAGAGC 
ACGGGCGCCA TCACGCGCCG GCACGAAGCG ATCCTGACCG TGTTGTTCGA CAACGCGACC 
GCCGATCCGG CGGTCGCCGC CGCGGCCGAG CAGGCGATCA AGCGCTACCG CGAGCACCTG 
AGCGTCATCG CCGAGCATCT GGTGGGCCTC GGCGCGGTGC ACACCGACGA GGTCAGGACC 
GAGCAGGTTC TATGGTTCTT CTTCGGGCAG ACGGCCTGGA AGACGGTCCG CGGATTCGGC 
TGGAGCTGGA CCGAAGGCGC CGAGTGGCTG ACGGCGCAAG CCGCATCGGC TCTGCTGCCT 
TAA
 
Protein sequence
MKRTYTSPVR AAGARETHAA ILRAAESLFV ERGYVQTTVA GIAERAGVAL NTVYTSVGGK 
PAIVEALAVE GTEDEGIQAS LAAVHVATEP REVLRLTAES TGAITRRHEA ILTVLFDNAT 
ADPAVAAAAE QAIKRYREHL SVIAEHLVGL GAVHTDEVRT EQVLWFFFGQ TAWKTVRGFG 
WSWTEGAEWL TAQAASALLP