Gene Caci_4198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4198 
Symbol 
ID8335552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4754787 
End bp4755917 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content69% 
IMG OID644957301 
ProductLuciferase-like monooxygenase 
Protein accessionYP_003114903 
Protein GI256393339 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACC CCACCGACCA GACCGCCGCT GCGACCGAGC AGAGCACCAC CACCAGGACC 
ATCCGCCACG GCGTGTCCTT CCTGCCGGAC TGCCGTCCGG AGAAGCGCTC GGCCGGCGAC
TACTACACCG ATGTCCTGGC CATCGCCCGG CTCGCCGACG AGGCCGGGTT CGACTACGTC
AAGATGACCG AGCACTACCT GGGGAACTAC GGCGGCTACT GCCCCAGCCC GCTAACATTC
CTGGCGGCGG TGGCCGCGCA GACCACGAGC ATCCGGCTGA TGACCGGCTG CGTCCTGCCC
GCCTTCCACC ACCCGGTGCA GCTCGCGGCG CACACCGCGA TGCTGGACGC GCTCAGCGGC
GGGCGGCTGG ACGTCGGCTT CGCCCGGGCG TGGCTGCCGT ACGAGTTCCA GGCGCTCGGC
GTGCCGCTGG ACTCCAGCCG GGACCGGTTC GAGGCGACGA TCCGCGCGGT GCTGCGGCTG
TGGACCGAGG AGCGGGTCAG CGAGGACACC GAGTTCTTCT CCTTCACCGA GGCGACCTCG
CTGCCGCCGG TGGTGCAGAG CCCGCATCCG CCGGTGTGGG GCGCGGCGAT CCGCTCGCCG
GAGAGCTTCC AGTGGCTGGC GCGGCAGGGC TTCGGCGTCC TGATCTCCCC GCCGCCGCTG
CGCAGCGAGC TGGGCTGGTC GCGCGACCTG ATCCAGCTGT ACCTGGACAC CTTCGCCGAA
GCCCATGCCG GCACCGATGT GCGCCCGCGC GTGGCGTTCA GCGTCCCGCT CTACGTCGCC
GAGACCGACG CAGAGGCCTA CGACACCGCG ATCCCGCACA TCCAGGAGTA CCTGGACGTC
ACCGCCGAGG CCGCGAACGC TTGGACCGGC GTGTCCTCCA GCAGTTACAA AGGCTACGAG
AACATGAAAC AGGCGTTCGG CCGGATCGGT CAGGACCAGT TGCGGCACGA CGGCGTGGCG
GTCGTGGGCT CTCCGGAGTC GGTCGTCGAG CAGATCAAGG AACTGCGCCA GGTACTTTCT
GCCGACGTGT GTCTGTGGAA TATCGACTAC GGTGGACAGG ACGGCGCGAC GATGCGGCGA
AGCCTGCGAC TGTTCGTCGA CGAGGTGTTG CCGCATGTTC GGGAGCTGTG A
 
Protein sequence
MTNPTDQTAA ATEQSTTTRT IRHGVSFLPD CRPEKRSAGD YYTDVLAIAR LADEAGFDYV 
KMTEHYLGNY GGYCPSPLTF LAAVAAQTTS IRLMTGCVLP AFHHPVQLAA HTAMLDALSG
GRLDVGFARA WLPYEFQALG VPLDSSRDRF EATIRAVLRL WTEERVSEDT EFFSFTEATS
LPPVVQSPHP PVWGAAIRSP ESFQWLARQG FGVLISPPPL RSELGWSRDL IQLYLDTFAE
AHAGTDVRPR VAFSVPLYVA ETDAEAYDTA IPHIQEYLDV TAEAANAWTG VSSSSYKGYE
NMKQAFGRIG QDQLRHDGVA VVGSPESVVE QIKELRQVLS ADVCLWNIDY GGQDGATMRR
SLRLFVDEVL PHVREL