| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4162 |
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| Symbol | |
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| ID | 8335516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4707164 |
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| End bp | 4708669 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644957265 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003114867 |
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| Protein GI | 256393303 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0950734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGCTG AAGAGCCCAG ACTGGCGGTG GCCCGGCTGA ACTGGGCCAA CCGGCAGGCC
GAGGCGGTGA AGGAGGCCGA CCGGCTGCTC GCCGAGCTCA CCGAGCCGGC CGAAGTGCTG
GGCGTCCTGC TGGCGAAGCT GTCCGCGCTG CTCAACATGG ACCACCTGCG CGAGTGCCCG
CCGATCATCG ACGCGGCCTG GGCCCTCATC CAGGAGCAGG GCGCCCGCCC GGCCGACGTC
GGGGAGTTCC ACGCCTTCGC GGCCTTCTTC GCCTACCGCA AGGGCTCGCT GGAACGCTGC
ATCACCGACC TGGTCCGCGG CGCCCAGGCG CTGGAGGCCA CGACCGCGGA CCGCGACGCC
ATCCGACCCT GGATCTCGAT GGCCGTCACC TACTCACTCG TCGGCTTCCA CCGCCACGCC
GTCGCCGCCC AACGCCACGC CGAGGACATC GCCCGCTTCG GCACCGCCGA GGACCGCAAG
CTCACCGCGC ACCCGGAGAT CCGCGTCCGC CAGGCGGTGT TCCTGGACCA GCGCGGCGAG
ACCGGCTCGG CCAAGGCGGT CCTCGGCGAC CTGGTCGATC GACTGAACGC CGACAACCTC
ATCGCGATGG AGGTCCCCTA CCTCGGCTAC GCGATGGCGC GCTACGCGGT CCTGGGCGGA
AAGTACGAAG GAGACGCAAG ACGCCTGCTG CGCCTGCGCC ACGAGCAATT CCCCGAGAGC
ATCGAGCTGT CCCGCCTCGG CGACGCGGCA CTACTCATAG CCGAGGGACA GCCCGGCGAA
GCGCTGGACC TCCTCGGCGA CGCCCGAACG GCCCAAACCC GCCTCGGCCG CGCCGAAGTC
CCCCGCCTCA GAGCACTGGC ACACATCGCC TCCGGCAACT ACGCAGCCGC CCACGCCGCC
GACCGCGAAG TGACCTACCT CCTCGCCCGA GCCAGCGAGC AGGTCTACGA CCTGTTCGTC
GACGGCATCA CCGCCCGCCT GGACTTCGAC GAACTCCGCC GCAACGTCAC CCGCTACGCC
GACGAGGCCC AAACCGACCC CCTGACCAGC CTCCCAAACC GCCGCCACCT GGAACGCTAC
GTCACGGAGC TGACGGCACG AGGCGGCGCA GGGGTCCTGG GAGTCGCCGA CCTGGACGGC
TTCAAGGAGG TGAACACGGT CCACGGGCAC CTGGTCGGAG ACGAGGTGCT GCAGCAGGTG
GCGGCGGTGT TGTCGCGCGC ACTCCGCGCC GGGGACTTCC TTGCACGGTA CGGCGGGGAC
GAGTTCGTGA TCGTGCTACC AGGCACGGGC CTCAGCGAGT CGCGCGAGGT GGTGGCCCGC
CTCAGGACAG CAGTCGCCGC ACACGACTGG GCCGGCCTCG CGCCCGGCAC GCCGGTGTCG
CTGACGATGG GGCTCACGGC GCTGGCGGGG CAGGGGTTGG CGGAGGCTTT TCGGGAGGCG
GATTTGTTGA TGTTGGAGGC TAAGGGGCAG GGGCGGGGGC TTGGGGCTGG TGGGCGGGGG
CGGTGA
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| Protein sequence | MRAEEPRLAV ARLNWANRQA EAVKEADRLL AELTEPAEVL GVLLAKLSAL LNMDHLRECP
PIIDAAWALI QEQGARPADV GEFHAFAAFF AYRKGSLERC ITDLVRGAQA LEATTADRDA
IRPWISMAVT YSLVGFHRHA VAAQRHAEDI ARFGTAEDRK LTAHPEIRVR QAVFLDQRGE
TGSAKAVLGD LVDRLNADNL IAMEVPYLGY AMARYAVLGG KYEGDARRLL RLRHEQFPES
IELSRLGDAA LLIAEGQPGE ALDLLGDART AQTRLGRAEV PRLRALAHIA SGNYAAAHAA
DREVTYLLAR ASEQVYDLFV DGITARLDFD ELRRNVTRYA DEAQTDPLTS LPNRRHLERY
VTELTARGGA GVLGVADLDG FKEVNTVHGH LVGDEVLQQV AAVLSRALRA GDFLARYGGD
EFVIVLPGTG LSESREVVAR LRTAVAAHDW AGLAPGTPVS LTMGLTALAG QGLAEAFREA
DLLMLEAKGQ GRGLGAGGRG R
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