Gene Caci_4139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4139 
Symbol 
ID8335493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4680064 
End bp4680513 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content69% 
IMG OID644957242 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003114844 
Protein GI256393280 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.200731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGATG CGAACGGACC GGGATACGAC TACGAGCGCC CGGGTTTTCT GATCAAGCAG 
GCGCAGGCGG TTTTACACGC GGAGATGACC CGCGCGCTGG CGTCGCACGG CGCCACGATC
AGCCAGTACG CCGTGCTCGC CGCCCTCGAT CAGGAGTCGG GCCTGTCCAA CGCGGAGCTG
GCACGGCGTG CGTTCATCAC CCCGCAGAGC ATGAACGAGA ACCTGCGCGA ACTCGAGCAG
CGCGCCTGGG TCATCCGTCA CCAGCATCCC GACCACGGCC GCATCCTTCA GACCGAACTC
ACCAAGGCGG GCCGTTCGGT TCTGCGGCAC TGCGAGGCCG CGGTCACCGC CATCGAGGAG
CGCATGCTCG CCGGGCTCGA CGCGGGTCAG CGCCGCGATC TCGCCGTGGC GCTTCGGTCC
TGCGTCACCG CGCTGGGTCC TGCGCGCTGA
 
Protein sequence
MADANGPGYD YERPGFLIKQ AQAVLHAEMT RALASHGATI SQYAVLAALD QESGLSNAEL 
ARRAFITPQS MNENLRELEQ RAWVIRHQHP DHGRILQTEL TKAGRSVLRH CEAAVTAIEE
RMLAGLDAGQ RRDLAVALRS CVTALGPAR