Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4138 |
Symbol | |
ID | 8335492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4678782 |
End bp | 4680089 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644957241 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003114843 |
Protein GI | 256393279 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.496821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCAAAA CCCGCGCCGA CCCGCCCTCG AACCCGCACC CGCAGCGGGA CCCGAAGCCG CAGCCGAACC TTCACCCGCG CCCCCAACTG CACCTGCTCC TCCTCCGCCC CGACTTCCGC TACTTCTTCA CCGGCCAGAC GGTCTCGCTG CTCGGTACCG CGATGTCGCC GGTGGCGCTC GCCTTCGCCG TCCTCGCCGC CTCCCATGAC AAGGCCACCG ACCTCGGCGT CGTGCTCACC GCGCACATGG TCCCGATGCT GGTGTTCCTG CTCGTCGGCG GGGCGACGGC CGACCGGTTC GCTCGCCGCA CCGTGCTCGT CTGGGCGAAC CTCGGCTCGG GACTCACTCA GGGCGCGGTC GCAGCGCTGC TGCTCACCGG CCACTTCTCG CTCGTCCTCG TGGCCCTGCT GGAACTGCTC AACGGCGTCC TCGCTGCCTT CACCACACCG GCGCTGCGCG GCTTCGTGCC CGAACTCGTC GAGCGGCACC AGATTCAGCA GGCGAACGCG CTGCTCAGCT CGATGCGCAA TGCCACGAAG ATCTTCGGGC CGAGCCTGTC CGGGGTCCTG GTCGTCGCGA TCGGCGGCGG TCCGGCCATC GCCTTCGACG CCGCGACGTA CCTGTTCGCA GCCATCTGCC TGCGCCTGCT GTCCTCGACC AGCCACCCGA AGAAGGCGGC CAGGACTGGA ATCCTCGCCG ACATCCGCGA GGGCTGGGGT CAGTTCCTCG GATTCCGCTG GGTCTGGACG GTGTCGGCGA CCTTCTGCCT GATGAACCTG GTGCAGACCG GTACCTGGCA GATCCTCGGC CCGGAGCTGA CGAAGAAGAC GAGCGGCGTC GCGGCCTGGG GCTTCGTGCT CAGCGCCCGC GGCGTCGGAC TGCTGGTCAT GAGCACGCTC CTGACCAGGC TGACGATCCG CCGCTTCCTG GCGTTCGGCC AGGTCATGAG CGCGCTTGGC GCAGTACCGC TGCTGATCCT CGGCGCGCGC CTGCCAGCGC CGTTCCTCAT CGCAGCCGCC TTCGTCGCCG GTCTCGGATC GGCGGTCGCG AGCGTCAGCT GGGACACTTC GCTCCAAGAG CATGTGCCGC CGCAGTCTCT GTCCCGCGTG TGCTCCTTCG ACGACCTGCT CTCCTACGCC GCGATCCCCA TCGGCCAGCT CAGCGTCGGA CCGCTCGCGG CAGCGTTCGG CGGCTTCCGA GTGGTCACCA TCGCAGGGTC CATCTATGCC GCCGCGGCGC TCTTCCCGCT CGCCTTCCGT CCCGTGCGGC GTCTGACGCA CATCAGCGCG CAGGACCCAG CGCGGTGA
|
Protein sequence | MPKTRADPPS NPHPQRDPKP QPNLHPRPQL HLLLLRPDFR YFFTGQTVSL LGTAMSPVAL AFAVLAASHD KATDLGVVLT AHMVPMLVFL LVGGATADRF ARRTVLVWAN LGSGLTQGAV AALLLTGHFS LVLVALLELL NGVLAAFTTP ALRGFVPELV ERHQIQQANA LLSSMRNATK IFGPSLSGVL VVAIGGGPAI AFDAATYLFA AICLRLLSST SHPKKAARTG ILADIREGWG QFLGFRWVWT VSATFCLMNL VQTGTWQILG PELTKKTSGV AAWGFVLSAR GVGLLVMSTL LTRLTIRRFL AFGQVMSALG AVPLLILGAR LPAPFLIAAA FVAGLGSAVA SVSWDTSLQE HVPPQSLSRV CSFDDLLSYA AIPIGQLSVG PLAAAFGGFR VVTIAGSIYA AAALFPLAFR PVRRLTHISA QDPAR
|
| |