Gene Caci_4109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4109 
Symbol 
ID8335463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4641549 
End bp4642826 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content69% 
IMG OID644957212 
Productsodium/hydrogen exchanger 
Protein accessionYP_003114814 
Protein GI256393250 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.478962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGCCA GTGCCCTGTC GCCCCGCTTC TTCATCGCCG TCGTCGTGAT CCTGTTGTTC 
TGCCGCCTGA TTTCCTGGTC CATCGGCAAG GTCGGGCAGC CTCCGGTCGT CGGCGAGATG
GTCGCCGGCG TGCTGCTCGG GCCCTCGCTG CTCGGCGCGG TCGCTCCGCG CCTGGAGAAC
GAGCTGTTCC CGAACGCGCT CAAGCCAGTG CTCTACATCG CCGGGCAGAT CGGCTTGGTG
GCGTTCATGT TCCAGGCCGG TCACGAGTTC CGGGCGCATC TGGATCGGCA CATCGCGCGC
GCGGCGGCGA CCGTGTCGGG GGCGGGGATC GTCGTGCCGC TGGCGTTCGG CGTGCTGCTG
GCGATCGGGG CGCACGGCCG TGTCAACATC TTCGTCGACG GCGTCTCGCC GGTGGTGACG
GAGGCGTTCG TCGGCGTCGC GCTGGCCATC ACCGCCTTCC CGATGCTCGC GCGGATCATC
ACCGAACGAG GGCTGTCCGG GACCCGCTAC GGATCGCTCG CGCTGGCCGC CGGTGCGATC
GACGACGTGG TCGCCTGGTG TCTGCTGGCC GGTGTGCTCG CCGTGGCCAC GGGACATCCC
AAGCCGATCC TGGTCGCCCT CGGCGGGATG GTGGTGTTCG GCTTGTCCGT GTACTACGCC
GCCCGGCCGC TGCTTGCCAG GACCCTGCGA CAGAGCGGGT CGGTGAGCGA CGGGCAGGTG
CTGGTCGTGG TCGCGGTGTT GTTCCTGGCG GCCTGGTTCA CCGACGAGAT CGGGCTCTAC
GCGGTCTTCG GCGCCTTCTG CGTGGGCATG GTGATGCCGC GCGACGACAC CGCCGAGCGT
GCGGTCGGGA CCATCAGCAC CAGCAGCCGG ATCATCTTCC TGCCGATGTT CTTCGTCTAC
TCCGGTCTCA ACACGCGTTT CGGGCTGCTG GGCAAACCGG CGCTGCTGCT GTTCTCGCTG
TTCGCGGTGA TCCTCGCCGT GGCCGGCAAG TTCTGGGCGT GCTGGCTCGC CGCCCGGCTC
AGCGGGCAGG ACCAGGCGAC GGCCGTGCGG CTCGGGACGC TGATGAATGC CAGAGGTCTG
ATGCAGCTCA TCGCGTTGAA CGTCGGGCTG CAGGCGGGCA TCATCAACAG CGAGCTGTTC
ACCGCGCTGG TCCTGGTCGC CCTTGTCACG ACCCTGATGG CTTCGCCCGC GCTCACGCTG
CTGGACCGGC GGCTTCCGGT CTCGGAGGAG GCCGGGAGCG CCGAGCCCGA CTCCCAGCTC
GCCGCGGCGC CGGCGTGA
 
Protein sequence
MSASALSPRF FIAVVVILLF CRLISWSIGK VGQPPVVGEM VAGVLLGPSL LGAVAPRLEN 
ELFPNALKPV LYIAGQIGLV AFMFQAGHEF RAHLDRHIAR AAATVSGAGI VVPLAFGVLL
AIGAHGRVNI FVDGVSPVVT EAFVGVALAI TAFPMLARII TERGLSGTRY GSLALAAGAI
DDVVAWCLLA GVLAVATGHP KPILVALGGM VVFGLSVYYA ARPLLARTLR QSGSVSDGQV
LVVVAVLFLA AWFTDEIGLY AVFGAFCVGM VMPRDDTAER AVGTISTSSR IIFLPMFFVY
SGLNTRFGLL GKPALLLFSL FAVILAVAGK FWACWLAARL SGQDQATAVR LGTLMNARGL
MQLIALNVGL QAGIINSELF TALVLVALVT TLMASPALTL LDRRLPVSEE AGSAEPDSQL
AAAPA