| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4051 |
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| Symbol | |
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| ID | 8335404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4581205 |
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| End bp | 4585014 |
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| Gene Length | 3810 bp |
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| Protein Length | 1269 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644957154 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_003114757 |
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| Protein GI | 256393193 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.544499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.21664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGGC CAGGACTTGC CACTCGTGAC GATCTGCTGC GCTGGCCGAG TATCGTCGCG
GCCGGGGAGT TCCCGCGCCT CATTCGGCGG CTGATCTTGG AGACTGTCCC GGATGCAGTC
CGGCTAGGTT TCCCTGCAGG ATCGGGAACT TCGGCGGGCA GCTGGGACGG TTCGGTTCGT
GCCGTAGCCG GCAATACGTT CGTCCCCGCC GGCCTGTCTG TGTGGGAGTT ATCGGTCGGG
CAGAGCGGCA TCGCCGCCAA GGCGGACGGC GACTACGAGA AGCGGACCAG CACGCCCGAC
GGCTCGCCCG TCTCCGATGC CGTATATATC GAGGCAATGC TCCGGCCGTG GCCCGACCGC
CGGACGTGGG CGGCAGGGAA GCGCGGCGAT CGGCGGTGGA AAGATGTAAT CGGCTACGGC
GTCGATGACA TCGAGGAGTG GCTCGAATCA GCCCCCGTTA CGCATTCGTG GGTATCGGAA
ATGCTCAACC TCGCGCCGCA CGGATACCGG GCCGTCGAGA CGTGGTGGCG AGGCTGGGCA
GGTGCGACCA CCCCAGTACT GCCGACAGGC GCAGTGCTCG CGGGCCGAGA CCGAGCCGTC
CAGGCGCTGG AGGACCGACT GGAGGGCACT CCCTCCATCA CCACAATCAG GGGCGTTAGC
CTGGATGAGG TCCTCGCGTT CATCGCCGCG GTGTTGGAGA GGCAAGCGAG CGCAGGCGAC
TCCCGGTGGC TGTCGCGCGC GGCTTTCGTC GACCAGGTGA CGAGTTGGCG CGCGTTGGCG
GAGCGACCTG GACCGCTGAT CTTGGTGCCG ACGACCGCCG ACGTCGCCGC CGAGGCGGCC
CGTGGGGCTG CCCACCACGT CCTAATCCCG GTGACCGCAG CCGCCGACAT TGACCTGCCG
CCCATCGACT CGCGCACCGC GGCCGTTGCC TTGCGGGCTG AAGGGCTCGG CGAGGGGTCC
GCTGAGCAGG CGGGCCGCTT GGCTCGGACA AGTCTGCTCG CGATGCGCCG CAGCCTGGCG
AGCAGGCCCG AACTTCACAC GCCCTCATGG GCATCGGGCC CGTCGCGCAC GCTGCGTGGT
CTGCTGCTGG CCGGGCGCTG GAGCCAGACT CACGACACAG ACCGAGCCGC TATTTCTGAT
CTGACCGGCG AGGATTACGA CACGCTCCGC GAAACTGTCG CAGGGCTGAA CCGCGCGAGC
GACCCGTTCG TCACCCAGAT CGGCTCGATC TGGATGCTGA CCAACATGCA CGATGCGTGG
ATCCATTTGT GCGAGACCGT CCGCCAAGAC GACCTGGACC GGCTCGAGCC CGTGCTGCGA
AGGGCACTCT TGGAACGGGA CCCGGCGCTC GACTTGAGCC CGGATGACCG ATGGTCCGCC
GGCGCCGTCG GCAAGTCGCC GACGCACTCC GCCGACCTGC GCCGCGGTCT TGCAACGACA
CTGGCAGCTC TCGGAGTCCA CGGACAGGTG ATCGACACCG GTCACGGGAC CAATGGCGCT
CAGTGGGCGG CCCGCTTCGT CGGCGACCTG CTGCGGGAAG CCAACGCAGA TACGACCGGA
GACACATGGA ACTCGCTGGC CGGGCTACTG CCGCTGCTGG CTGAGGCGGC GCCCGACGCC
TTCTTGGATG GGCTGCGAAA TGCGAGCCAG GGTGCCGTCC CGGTGATCTC CACGATGTTT
ACCGACAGCA CGACGACTTC GGTTACCAGG GAGCTCTCGC GCCACCACCA CCTGCTCTGG
GCGTTGGAAA CGCTTGCCTG GTCTCCAGAC CACTTCGGCC GCGTGGTCCT GCAACTTGCG
CGGCTAGCGG AGATCGATCC TGGCGGGTCT CTGTCCAGTC GCCCGTTCAA CTCGCTGGTC
ACGGTCTTGT GTCTGGAGTA CCCCGAGACC ACGGTGCCCG TTGCGGGACG GATGGCGGTC
ATCGAGAGGC TACGAGACCG CCATCCCGAC GTCGCATGGC GGCTGATGCT CACGCTGCTC
CCGTCCCAGT TCGACTTGCA CGGCCCGACA CCGAACCCTG AGTTCCGCGA CTGGAAGCCA
CAGGAACCCG TCGCGGTGAC CGCAGATGAA TGGCTGGACT GTGTTCGGAC GCTCGTCAAC
TGGCTCATCC TCGACGCCGG CGACAACGTA CGACGATGGC AGCAGGTCCT CGACGTCTTC
CCGTTCCTGC CGAAAAGCGA TCGCCAGCGC CTGCGGGAGG CGATGGCGAC GCGGGTCGGT
GATGGAACAC TTAGCGATGA CGGGCGGGCT GATTTGTGGG AATCCCTACG GGAGCTCATC
ACTCACCACC GCTCGCGCGC CGGCAAGCCG GGATCGTTGC CAGTCGATGA GGTGGACGCA
CTCCAGGACA TCGAACGGGC CCTCGCCCCC TCCGATCCGG TCCAACGGCA CCGGTGGCTG
TTCGCGACGC AGATGCCGGA ACTAGCTGAA CACCGCCGGT TCGGCGACCC TGCATACGAC
TCCGCCGTGC AGGACAAGCG GATCGCGGCG ATCACTGAGA TTGAAGAGCG CGGAATCGAC
GCAGTGCGGG AGGTCGCGGC GACCGCCGCC GACGCGAGGA CAGTCGGCGT GTGCCTGGCC
GAGGTGGCAG GCGACAAGTA CCGTTCCGAA CTCGTCGCCA TGATCCCGGC GGACCCGGCC
GGCACGGCGT TGATCGAGGG CTGGCTCTCA CGGCAGTTCC AAAAGGATGG TTGGACCTGG
TTGGACGGGC TCCTCGCTGA GGAACTCACG CCGGAGCAGG CGGCAGTGGC GTTGTTGGCG
TCGCGGGACT ACCCGAAGGC GTGGGAGGTC GCCGAAGCCC ACGGGACGCC GGTCGCGGAG
GCGTTCTGGA AGTATTTCTC GATCAACGGC CTGGGGCGGG ACTTTGGCCA CGTCGGCGAG
GCAGCGAGCC AGTTGGCGCA GGCCGGGCGC GTAGCCGCGG CACTGAAGCT CGTCGTCATC
TACCTGGACG ACCTTGGCGA CACCTCTGCA GATCTGCTCA TTCGCCTTCT CGGCCAGTTC
GCCGACACCT ACCAATCGGA CCCTGAGACA GGGCTGGTCG GCGAGTACGA CTTCCGGGCG
CTCTTCGAAT ACCTGCACCT GCACACCGAT CCACAGCGCA GCACCGAAAT CGGCCAGCTG
GAATGGGTCT TTCTCTCCGG TCTGGGATTC CAGCCGCCCG CCGGCCGCCT TCGCGAAGCG
CTGGCCGCCG AGCCGGAGCT CTTCGTGCAG ATCATGTCGT CCACCTGGCG AGCAACGGAT
GCGCAGGAGA ACGACGAAGA CAGCCAGGGC GAGGGCGCCG AGCCGGAAGA CGAAACGCTC
ACCAAGGAGC AGGTACAGCA GGCGACGAAC GGATACGCAC TCCTGACGTC CATTGATCGA
CTCCCCGGGA TCGGCCCGGA CGGGCGAGTT GATCCTGCGG CCCTCCAGCA GTGGGTAGCC
CGGGTCCTCG AACTCGCTAC CGCGTCTGGC CGACGAAGAA TCGCCGAGAT GCTGGTCGGG
CAGATGCTGG CGAGCGCGCC AGCCGACGAC GACGGCACCT GGCCATGTCA GCCGGTACGA
GACCTGCTCG AAGAGCTACA GAGCGAGCGA GTCGAGCGGA GTCTCGCCGC ACAGCTCTAT
AACGACCGCG GAATGACCTC GCGCGATCCG GAGGACGGCG GCAGGCAGGA ACGAGCGCTG
GCTGAGAGGT ATCTGGCGCA GGCCACGACG TTCTCTGACA GTTGGCCCCA GACCGCGGTA
GTTCTAAGAA GGGTCGCCTC CATGTACGAA ACTGATGCGC ACGAGCACGA TGACAGGGCC
GAACGATTCC GCCAAGGGCA GCAAACATGA
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| Protein sequence | MARPGLATRD DLLRWPSIVA AGEFPRLIRR LILETVPDAV RLGFPAGSGT SAGSWDGSVR
AVAGNTFVPA GLSVWELSVG QSGIAAKADG DYEKRTSTPD GSPVSDAVYI EAMLRPWPDR
RTWAAGKRGD RRWKDVIGYG VDDIEEWLES APVTHSWVSE MLNLAPHGYR AVETWWRGWA
GATTPVLPTG AVLAGRDRAV QALEDRLEGT PSITTIRGVS LDEVLAFIAA VLERQASAGD
SRWLSRAAFV DQVTSWRALA ERPGPLILVP TTADVAAEAA RGAAHHVLIP VTAAADIDLP
PIDSRTAAVA LRAEGLGEGS AEQAGRLART SLLAMRRSLA SRPELHTPSW ASGPSRTLRG
LLLAGRWSQT HDTDRAAISD LTGEDYDTLR ETVAGLNRAS DPFVTQIGSI WMLTNMHDAW
IHLCETVRQD DLDRLEPVLR RALLERDPAL DLSPDDRWSA GAVGKSPTHS ADLRRGLATT
LAALGVHGQV IDTGHGTNGA QWAARFVGDL LREANADTTG DTWNSLAGLL PLLAEAAPDA
FLDGLRNASQ GAVPVISTMF TDSTTTSVTR ELSRHHHLLW ALETLAWSPD HFGRVVLQLA
RLAEIDPGGS LSSRPFNSLV TVLCLEYPET TVPVAGRMAV IERLRDRHPD VAWRLMLTLL
PSQFDLHGPT PNPEFRDWKP QEPVAVTADE WLDCVRTLVN WLILDAGDNV RRWQQVLDVF
PFLPKSDRQR LREAMATRVG DGTLSDDGRA DLWESLRELI THHRSRAGKP GSLPVDEVDA
LQDIERALAP SDPVQRHRWL FATQMPELAE HRRFGDPAYD SAVQDKRIAA ITEIEERGID
AVREVAATAA DARTVGVCLA EVAGDKYRSE LVAMIPADPA GTALIEGWLS RQFQKDGWTW
LDGLLAEELT PEQAAVALLA SRDYPKAWEV AEAHGTPVAE AFWKYFSING LGRDFGHVGE
AASQLAQAGR VAAALKLVVI YLDDLGDTSA DLLIRLLGQF ADTYQSDPET GLVGEYDFRA
LFEYLHLHTD PQRSTEIGQL EWVFLSGLGF QPPAGRLREA LAAEPELFVQ IMSSTWRATD
AQENDEDSQG EGAEPEDETL TKEQVQQATN GYALLTSIDR LPGIGPDGRV DPAALQQWVA
RVLELATASG RRRIAEMLVG QMLASAPADD DGTWPCQPVR DLLEELQSER VERSLAAQLY
NDRGMTSRDP EDGGRQERAL AERYLAQATT FSDSWPQTAV VLRRVASMYE TDAHEHDDRA
ERFRQGQQT
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