| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3893 |
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| Symbol | |
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| ID | 8335246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4416414 |
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| End bp | 4417142 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644957019 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_003114622 |
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| Protein GI | 256393058 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0012751 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0102027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGTGGC GCGCGTTGAA GAAGATGCGG CGTAATCCGG AGCAGTTCTT TGATGTGACG
ATTCAGCCGC TGCTGTTCAC GGCGATGTTC GCCTACATCT TCGGCGGTGC GATTTCCGGC
GGGGTCAGTG CGTATCTGCC GGTGCTCATT CCCGGGATCG TGGCGCAGAC GGTGCTGACG
ACGTGCATGT CGACGGGGGT GCAGTTGCGG GAGGACATGG AGAAGGGGGT GTTCGACCGG
TTCAAGTCGC TGCCGATGGC GCGGATCGCG CCGCTGGCCG GGCCGATGAT CGCCGACCTG
CTGCGGTACC TGATCGCCGC CGGTTTGACG TTCGTGGCGG GTCTGATCAT CGGCTACCGT
CCCGGTGGCG GGGTGGTGGG GGTGGCCGGT GCGATGGTGC TGGCGATCGT CACCGGGTGG
TCGCTGGCGT GGATCTTCAC GTGGCTCGGC ACCATTACCA AGAGTGCCAA GTCGGTGCAG
GGCATCTCGA TGATGATCCT GTTCCCGTTG GCGTTCCGGT CGAACGCGTT CGTGCCGGTG
CAGACGCTGC TGAACTGGCT GGCCGACCTC GTAAAGGTCA ACCCGGTCTC GCATCTGGTC
TCCGGCACCT GCGCGCTGGC CAACCGCGGC GTGATCAGCG GTGAGGTCGG CTGGACGCTG
CTGGCGTGCG CGGTGGTCAT CGCAGTCTTC GCACCGTTGT CCATGCGCGG CTACCGCCGC
CACCTGTAG
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| Protein sequence | MAWRALKKMR RNPEQFFDVT IQPLLFTAMF AYIFGGAISG GVSAYLPVLI PGIVAQTVLT
TCMSTGVQLR EDMEKGVFDR FKSLPMARIA PLAGPMIADL LRYLIAAGLT FVAGLIIGYR
PGGGVVGVAG AMVLAIVTGW SLAWIFTWLG TITKSAKSVQ GISMMILFPL AFRSNAFVPV
QTLLNWLADL VKVNPVSHLV SGTCALANRG VISGEVGWTL LACAVVIAVF APLSMRGYRR
HL
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