Gene Caci_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3816 
Symbol 
ID8335169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4315899 
End bp4316996 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content70% 
IMG OID644956955 
ProductAcetyl xylan esterase 
Protein accessionYP_003114558 
Protein GI256392994 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3458] Acetyl esterase (deacetylase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.232688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGT TCGACCTGCC ACTGGACCAA CTTGAACGGT ATCTTCCGGA CGTGCCTGAG 
CCCGCCGACT TCGACGCGTT CTGGCAGAGG TCCCTGAACA CCGCCGACGG CTGCCCGCCA
CTGCTCGACG TCCAGCCCGA ACCCACAGAC CTCGAACTCG TCCAGACCTG GGATGTCGCC
TTTCCCGGAT TCGGCGGCGA TCCGATTCGG GCCTGGTACT GCCGGCCCGC GGGCGTGAGC
GATCCGCTTC CGGCGGTGGT GGAGTTCCTC GGCTACGGTC GCGGCCGTGG CCTGCCGCAC
GAGCGGCTGA CGTGGGCCGC GGCCGGCTAC GCGCACCTGC TGATGGACAC CCGGGGACAG
GGCGATCAGT ACGGCACCGG CGGTAGGACT CCCGACCCGC ACGCGACGGC GCTGGGTGGT
CCGGGACCGA TGACCCGCGG TGTCCTGCAC CCCGACGACT ACTACTACCG GCGCTTGATC
ACCGATGCCG TGCGGGCGGT CGACGCCGTC AGGGCTCTGC CGGGTGTGGA CGCGGGCCGG
ATCGCGGTGG TGGGCAACAG CCAGGGGGGC GGGCTGGCGC TCGCCGTCGC CGGTCTCGTG
CCGGATGTGG CCGCGGTGAT GGCGTCAGTC CCCTTCCTGT GCCACATCCA GCGGGCGATC
GACATCACCG ACAGCACGCC TTATGGCGAG ATCGTGAGCT ACCTGTCGGT TCACCGCGAT
GCCGAAGCAG CGGTGCGGCG CACCCTGTCG TATGTGGACG CGGTCGGCTT CGCACGTCGG
GCTGTCGCCC CGGCGCACTT CGGCGTCGGC CTGCGGGATA CCGTCTGCCC GCCGAGTACC
GTGTTCGCGG CCTACAACCA CTACGGTGCC GCGGACCGCA CGATACATGT CTACCCGTTC
AACCATCATG AGGGCGGCGA CGCCGTGCAC ACCGCCCGTC AGCTGCGGTG GTTGCGTTCG
CGGCTCGCCG CCGTGGACGG TGCGGCGCCC GGTGGCCGGC AGACGTCGAA CAACCCGGCC
TCTGAGTTGT TCAGCGAGAA GCAGAACTCG ATGACACCGG CGCCGTCGGC TCCTGGACCG
AGGAGGCCGA GTAGCTGA
 
Protein sequence
MALFDLPLDQ LERYLPDVPE PADFDAFWQR SLNTADGCPP LLDVQPEPTD LELVQTWDVA 
FPGFGGDPIR AWYCRPAGVS DPLPAVVEFL GYGRGRGLPH ERLTWAAAGY AHLLMDTRGQ
GDQYGTGGRT PDPHATALGG PGPMTRGVLH PDDYYYRRLI TDAVRAVDAV RALPGVDAGR
IAVVGNSQGG GLALAVAGLV PDVAAVMASV PFLCHIQRAI DITDSTPYGE IVSYLSVHRD
AEAAVRRTLS YVDAVGFARR AVAPAHFGVG LRDTVCPPST VFAAYNHYGA ADRTIHVYPF
NHHEGGDAVH TARQLRWLRS RLAAVDGAAP GGRQTSNNPA SELFSEKQNS MTPAPSAPGP
RRPSS