Gene Caci_3595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3595 
Symbol 
ID8334948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4013179 
End bp4014465 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content71% 
IMG OID644956738 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003114341 
Protein GI256392777 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2182] Maltose-binding periplasmic proteins/domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.931004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC AGTCCATAGC CCGGCGTGTC GCAGCGGCCG GTCTGGCTTT GGCGGTCACC 
GGAGCAGCCG GCGCCTGTTC GGCGTCCAAG AGCTCGACGG GATCGGCCGC CTCCGGTGGC
GGAACCTCCG CAGCGGCCGG CGGCGGCGGC GGAACCTTCA CCGTCTGGGA CCCCTACCCG
CAGTTCGACA ACGGCTCGGC CTGGTCCCAG CTGCTGACCA AGTGCGGCAG CCAGGCCGGG
GTGACGGTCA AGCGCACCGG CTTCGACACC ACCGACCTGA CCACCAAGGT GCTGCTGGCC
GCGCAGCAGG GCAACTCCCC GGACGTGCTG ATCGTCGACA ACCCGGTGGT CTCCACGCTC
GCCGACGCCG GCGTGATCAC CGACACCGGC ACCACGCATC TGGACACCAC GGCGATCGCC
CCGAACCTGC TGGCCGCGGG GCAGCTCGCC GGGAAGACCT ACGGCGTGCC GATCGGCGCC
AACACCCTGG CGCTGTACTA CAACAAGGCG GTGCTGTCGG CGGCCGGCGT GGACATCTCG
ACCGTGAAGG ACTGGTCCAC CCTGACCGCC GCGCTGGCGA AGGTCACCGC GGCCGGCAAG
AAGGGCATCA CGTTCTCGGC GATCGGCACC GAGGAGGGCA GCTTCCAGTT CCTGCCGTGG
TTCTGGGGGT CGGGGGCGGA CCTGAAGAAG CTGGACTCCC CGCAGGGGGT CTCGGCGCTG
GCGCTGTGGA CGGACTGGCT GAAGAAGGGC TACGCCCCGA ACTCGGTCAT CAACAACACC
CAGACGACCA GCTGGCAGGA GTTCGCCACC GGGCAGTACG CCTTCAGCGA GAACGGCACC
TGGCAGCTGG CCAACGCCAA GAAGGCCGGG TTCGACTACG GCATCATCCC GATCCCGGCG
CTGAACGGCG GAACCGCCGC GGCGCCGACG GGAGGGGAGT TCGTCACCGT CCCGGTCCAG
GACAAGACCG ACCGCTACGC GACCTCGCAG AAGCTCGTGA GCTGCCTGAC CAGCGCCGAC
AACGCGCAGG CGACCGACAC CACGCTGTCC TACGTCGCGG CCACGCCGCA GGTGCAGGCC
AAGCAGGTCG CCGCCGACCC CGCCCTGCAG CCGTGGGTCG CCGCGGTCGC CGCGGCCAAG
GGACGCACCA GCGACGACCT GGGGACGAAG TACCCGAAGA TCTCCCAGCC GATGTGGACC
GCGGTCCAGG CCGCGCTCAG CGGCTCGGCC TCGCCGCAGT CGGCGCTGAC GACCGCGCAG
AACGCCGCCG CCGCGGCGAC CAAGTGA
 
Protein sequence
MKAQSIARRV AAAGLALAVT GAAGACSASK SSTGSAASGG GTSAAAGGGG GTFTVWDPYP 
QFDNGSAWSQ LLTKCGSQAG VTVKRTGFDT TDLTTKVLLA AQQGNSPDVL IVDNPVVSTL
ADAGVITDTG TTHLDTTAIA PNLLAAGQLA GKTYGVPIGA NTLALYYNKA VLSAAGVDIS
TVKDWSTLTA ALAKVTAAGK KGITFSAIGT EEGSFQFLPW FWGSGADLKK LDSPQGVSAL
ALWTDWLKKG YAPNSVINNT QTTSWQEFAT GQYAFSENGT WQLANAKKAG FDYGIIPIPA
LNGGTAAAPT GGEFVTVPVQ DKTDRYATSQ KLVSCLTSAD NAQATDTTLS YVAATPQVQA
KQVAADPALQ PWVAAVAAAK GRTSDDLGTK YPKISQPMWT AVQAALSGSA SPQSALTTAQ
NAAAAATK