Gene Caci_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3554 
Symbol 
ID8334907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3968695 
End bp3969264 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content68% 
IMG OID644956697 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003114300 
Protein GI256392736 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAATCG ACCCCCCTGC CGGATCGGAT CCCACGACCG CGGCGGGCCC GGACTTCGCC 
GGCGGCGCCG TCCCCGCAGG CGAGGCCAGG ATCCGGGACC TGATGGCGGC CACCGTCGAG
CTGGCCCTGT CCTCGGTCGC CCTCACATCC ATGGGCGCCT CGCTGATCGG AATGCATCCC
ACGGACATGT TCTGTCTGTG GCACGTCACC GAGAGCGCCG CCTCCGAACC AGTGACCTCC
GGCAAGCTCG GCGAACTCAC CGGACTGACC AGCGGCGCCA TCACCGGCGT CATCGACCGC
CTGGAAGCGG CCGGCTTCCT GCGCCGCGAA CGCGACACCC AGGACCGCCG CAAGCTCTTC
CTGGTCCCCG TCCCGGAAAA AGTCGGCCAG ATCTACGAGC TCTACGCCCC CCTGCACGAA
ACCTTCCGCG CCGCCGAAGC CCGCTACGAC GAAAAGCAGC AGGAACTGAT CCTGGCCTTC
CTGCGCACCA CCACCGAGCT CATGCGCCAC AACGTCAACA CCATGCGACA AGCCCGCAAG
GAAGAACGCC GCAACGGCAC GGCGGGCTAG
 
Protein sequence
MSIDPPAGSD PTTAAGPDFA GGAVPAGEAR IRDLMAATVE LALSSVALTS MGASLIGMHP 
TDMFCLWHVT ESAASEPVTS GKLGELTGLT SGAITGVIDR LEAAGFLRRE RDTQDRRKLF
LVPVPEKVGQ IYELYAPLHE TFRAAEARYD EKQQELILAF LRTTTELMRH NVNTMRQARK
EERRNGTAG