Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3554 |
Symbol | |
ID | 8334907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3968695 |
End bp | 3969264 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956697 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003114300 |
Protein GI | 256392736 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCAATCG ACCCCCCTGC CGGATCGGAT CCCACGACCG CGGCGGGCCC GGACTTCGCC GGCGGCGCCG TCCCCGCAGG CGAGGCCAGG ATCCGGGACC TGATGGCGGC CACCGTCGAG CTGGCCCTGT CCTCGGTCGC CCTCACATCC ATGGGCGCCT CGCTGATCGG AATGCATCCC ACGGACATGT TCTGTCTGTG GCACGTCACC GAGAGCGCCG CCTCCGAACC AGTGACCTCC GGCAAGCTCG GCGAACTCAC CGGACTGACC AGCGGCGCCA TCACCGGCGT CATCGACCGC CTGGAAGCGG CCGGCTTCCT GCGCCGCGAA CGCGACACCC AGGACCGCCG CAAGCTCTTC CTGGTCCCCG TCCCGGAAAA AGTCGGCCAG ATCTACGAGC TCTACGCCCC CCTGCACGAA ACCTTCCGCG CCGCCGAAGC CCGCTACGAC GAAAAGCAGC AGGAACTGAT CCTGGCCTTC CTGCGCACCA CCACCGAGCT CATGCGCCAC AACGTCAACA CCATGCGACA AGCCCGCAAG GAAGAACGCC GCAACGGCAC GGCGGGCTAG
|
Protein sequence | MSIDPPAGSD PTTAAGPDFA GGAVPAGEAR IRDLMAATVE LALSSVALTS MGASLIGMHP TDMFCLWHVT ESAASEPVTS GKLGELTGLT SGAITGVIDR LEAAGFLRRE RDTQDRRKLF LVPVPEKVGQ IYELYAPLHE TFRAAEARYD EKQQELILAF LRTTTELMRH NVNTMRQARK EERRNGTAG
|
| |