| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3516 |
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| Symbol | |
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| ID | 8334869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3922240 |
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| End bp | 3924234 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644956660 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003114263 |
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| Protein GI | 256392699 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.390317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0637754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAACC GCTGGGATGA GAACGAGGCT CCGGCTGATG GAGACCTCTT AGATCAGTGT
GTTTATGTCA GCCGTCTGTT GGGCGCCGAC CCGGACTTGG TGCTGCACGG TGGCGGGAAC
ACTTCGGTCA AGACGGTCTC GCGGGACGCT TTGGGCCGGG ATGTCGACTC GCTTCAGGTG
AAGGGGAGCG GGTGGGACCT GGCGACCATC CAGCGTCCTG GGTTCGCGCC GCTTCGGCTG
GCGCGGCTGC GCGAGATTCT TGAGGCCGAG TCGCTGTCCG ATAGCGCCAT GATGAACGAG
CTGCGGTGTG CGTTGCTGGA CGCGAGCGCG CCGGATCCGT CGGTGGAGAC GCTGTTGCAT
GCGCTCATCC CGGACACGTT CGTGCTGCAC ACTCACGCTG ACGCGGTCCT CACGCTCACG
AATCTCGACG ATGGCGAGGC GCGCATTCGC GAGGCGTTGG GCGAGGACCA CATCGCAGTG
CCCTACGTCA TGCCGGGGTT CGATCTGGCG AAGTACTGTC GCGATCAGCT TCGTGGTCGC
GGTGATGCGT TGCCGCAGAC GATGATTCTG TTGCGGCACG GCGTTTTCAC GTACGGAGAG
TCGGCGCGCG CTGCCTACGA TCGGATGATC GAGGTCGTGG GGCGGGCTGA GCAGTACATC
GCCGAGCGTA CGCGGGCAGC GAGGTCGACG CCGACGCCGA CGATGCAGGC TTCGCCTTCG
GAGACTACTG CGCCGGACAT CCTTGACGTG GCATCGCTGC GGCAGGCGGT TTCGCGGGTG
GCGGGCGTGC CGATGATCGC CACGCGTTCG GCGGATGCGG CTAGTGCGGA GTTCTGCTAT
CGCCCGGATC TGGCGACCGT GTCTCAGCAG GGCCCTGCGA CGCCGGACCA CGTCATCCGC
ACCAAGCGCT TGCCGATGAC CGGGCGCGAT GTGGATGCGT ACGCGAAGGA GTACGTCGCT
TATTACGAGT CCCAGGAGTC GCCTGACGCC GATCCGCCGA CGACGATGGT CGATCCGGCG
CCGCGCATCG CGCTAGACCG CGATCTCGGG CTGGTCGCGT TCGGCCGGCG TCCGAAGGAC
GCGGGTATCG CCGCTGACAT CTACCGGCAC ACAATCGGCA TCGTCGAGCG CGCGGAGGAG
TTGGGCGGGT ATCGCGCGCT GTCTGCGGCG GACGTGTTCT CCGTCGAGTA CTGGGAGCTC
GAGCAGGCGA AGCTGCGGCG CGCCGGTGGC ACGCCGGAGT TCGCCGGCGA GGTGGCGCTG
GTGACCGGCG CGGCTTCGGG GATCGGGCGG GCGTGCGTGA AGGCGCTCGT GGCGCGGGGC
GCTGCCGTCG TCGGGTTGGA TGTCGAGGAC GCGGTGACGT CGATCGCGCC GGCGCCGGAT
TACCTCGGCG TCGTCACGGA CGTCACCGAC TCCGGCGCCG TCAAGGACGC GATCGCTCAG
GCTGTGGACC GCTTCGGCGG GATCGACATG CTGATCGCCT CCGCTGGCGT CTTCGGTCCC
AGCCGGGCGA TGAGCGATTT CGATCCGCAG CAGTGGCACG GCACGTTGTC GGTGAACACC
GAGGCGTTTG CCGCTTTGCT GTCACAGGTT CACGGCTTGC TCAAGCTCGC TCCTCGGTAC
GGACGTGTCG TGCTCATAGG GTCGAAGAAC ACTGCGGCGC CTGGTCCTGG AGCCGCCGCC
TACTCGGCAT CGAAGGCTGC TGCGACGCAA CTCGCGCGCG TGGCGGCTCT GGAATGGGCT
GGCGACGGCA TCCGGGTCAA CGTCGTGCAT CCCGACGCCG TTTTCGACAC CGGCTTGTGG
ACGCCGGAGA TCATCGAGGC CCGCGCCGCG CACTACGGCA TGACCGTGGA GCAGTACAAG
CGACGCAACC TGCTGCGCAC GGAAGTGACG AGCGAGGTGG TCGGCGCCGT GGTCGCAGAC
GTCTGCGGTC CGTCGTTCCG GGCGACGACC GGCGCGCAGA TCCCCGTCGA CGGCGGGAGC
GACCGGATCA TCTGA
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| Protein sequence | MRNRWDENEA PADGDLLDQC VYVSRLLGAD PDLVLHGGGN TSVKTVSRDA LGRDVDSLQV
KGSGWDLATI QRPGFAPLRL ARLREILEAE SLSDSAMMNE LRCALLDASA PDPSVETLLH
ALIPDTFVLH THADAVLTLT NLDDGEARIR EALGEDHIAV PYVMPGFDLA KYCRDQLRGR
GDALPQTMIL LRHGVFTYGE SARAAYDRMI EVVGRAEQYI AERTRAARST PTPTMQASPS
ETTAPDILDV ASLRQAVSRV AGVPMIATRS ADAASAEFCY RPDLATVSQQ GPATPDHVIR
TKRLPMTGRD VDAYAKEYVA YYESQESPDA DPPTTMVDPA PRIALDRDLG LVAFGRRPKD
AGIAADIYRH TIGIVERAEE LGGYRALSAA DVFSVEYWEL EQAKLRRAGG TPEFAGEVAL
VTGAASGIGR ACVKALVARG AAVVGLDVED AVTSIAPAPD YLGVVTDVTD SGAVKDAIAQ
AVDRFGGIDM LIASAGVFGP SRAMSDFDPQ QWHGTLSVNT EAFAALLSQV HGLLKLAPRY
GRVVLIGSKN TAAPGPGAAA YSASKAAATQ LARVAALEWA GDGIRVNVVH PDAVFDTGLW
TPEIIEARAA HYGMTVEQYK RRNLLRTEVT SEVVGAVVAD VCGPSFRATT GAQIPVDGGS
DRII
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