Gene Caci_3497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3497 
Symbol 
ID8334850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3899485 
End bp3900492 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content72% 
IMG OID644956641 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003114244 
Protein GI256392680 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.185668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCGC CGCCCGCCGA GATCGCCCCG CCGCTGATCC CGTACCGGAG TCGGCGGCGG 
CGGTGGTTGC GCCGGGTCGC GAAGACGGTC GCGGTCGCCT TCGTCGCGAG CACGTTCCTG
TCCACCGCGT ACAACGCCGC CACGAATGCG CGTGACTCTG TTCCGGCAGG GCTGACCTAT
GTACAGGCCG GGGACGTATC GACCCGCTAC CGCGAGTGGG GCTCGAGTGG AACGCCGATC
GTGCTGGTGC ACGGCTTCGT CGAGTCGGCG GACACCTGGC AGTACCTCGC GCCGCTCCTG
GCCGCGCAGG GGCATCGGGT CTATGCCCTC GACATCGACG GCTGGGGCTA CTCGCAGCGC
GTCGCGCCCT TCGACGTCGG GCATCAAGCG CGGCAGCTCG ACGCGTTCAT CGAGGCGCTG
CACCTGGCCA AGCCGGTGCT GGTCGGCCAC TCCAGTGGCG CCGCCGTAGC TGCCCTCGCG
GTGCTGGACA AGCCCGGCGA CGCCAGCGGC GTCATGTTCC TCGACGGCGA CGGACTGGCG
ACCGGCGCGG GCCAGAAGAC CCCGCTCACG CACCTGTTCC TCAACCCCTA TCGCACGACC
CTGATGCGCC TGGCCGTCCG CTCCGACACC GTCATCCGCG CCATCTACGG CGCCACCTGC
GGCTCCGGCT GCCCCAAGCT GGACGCCGCC GGCCTGGACC AATGGCGCCG CCCCCTCGAG
GTCCCAGGCG CCGAGGAATC GCTGTGGAGC ATGGTGAACC TCGGCGTAGC CGGACTACCC
CCGACCCGCC TGGCCGAACT CGCCACCCTC CCCATCCCGA AGGCGGTCGT ATTCGGCGGC
GCAGACTCCT CCTACACCCC GAACTCCCCG CAGACCACCG CCACCCGCAT CGGCGCCCCC
GCCCCGACCA TCATCCCCGG AGCCCAACAC CTCACCTCGG TCAACAGCCC CGCAGCCGTC
GCCGACGCGG TCGCGGCTTT GGAGGCGCGC GCCGCGGACT CGCCCTAG
 
Protein sequence
MTAPPAEIAP PLIPYRSRRR RWLRRVAKTV AVAFVASTFL STAYNAATNA RDSVPAGLTY 
VQAGDVSTRY REWGSSGTPI VLVHGFVESA DTWQYLAPLL AAQGHRVYAL DIDGWGYSQR
VAPFDVGHQA RQLDAFIEAL HLAKPVLVGH SSGAAVAALA VLDKPGDASG VMFLDGDGLA
TGAGQKTPLT HLFLNPYRTT LMRLAVRSDT VIRAIYGATC GSGCPKLDAA GLDQWRRPLE
VPGAEESLWS MVNLGVAGLP PTRLAELATL PIPKAVVFGG ADSSYTPNSP QTTATRIGAP
APTIIPGAQH LTSVNSPAAV ADAVAALEAR AADSP