Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3299 |
Symbol | |
ID | 8334652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3639586 |
End bp | 3641061 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644956444 |
Product | amino acid permease-associated region |
Protein accession | YP_003114047 |
Protein GI | 256392483 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.388288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACAA TGGATTCCCC CTCCACCGTG CCCGCTCCGG CGCCGGCCGC GCCCGGGCCG GGTGACGACC GTCTGCGTGG CGGGTCGTTG AGCCTGCTCG ATATCGCCAG TTCGACGATG GCGAACATCG GGCCGGCGAT GAGTTTCTAC TTCGGGTTCG GTTTGTTGGC CACCACGGCC GGGGTGGCTT CGCCGCTGAC GATCGTGGTC GCCGGGCTCA CGGTCGCGTT GCTGGGCAAT ACGTTGGCCC AGTTCTCGCG GGCGCATCCG TCTGCGGGCG GGTTCATCAC GTTCGTGGGG AAGACGTTCG GGCCGACGAG TGCGGTGACC ACCGCGTTGC TGATCACCGC CGGGTACATC ATCGCCATCT CCTCGGTCAT CGCCATCTCC GGCGGGTTCC TGTCGATGAC GCTGAACTAC TACTTCGGCT GGAACGTGCC CTGGTTCCTG TTCACGCTGG TGCTCACGGC GCTGGCGGTG ACACTGATCA TCCGCGGGAT CGGGGTCTCC ACCAAGCTCG CCGGGTACTT CTTCGCGGTC GAGATGCTGG TGCTGGTCGT GGTGTCGGTG GCGACCATCG CCAAGCACGG CGCGCACCTG TCGATCAAGC CGTTCACGCC GAGCCACGTC AAGGGCGGCA TGTCAGGGCT CGCCGAAGGT TTCCCGCTGG CCGTCTACAT GTTCGTGGGC TGGGAGAACT CGGCGGCGCT GGCCGAGGAG ACCGAGAATC CGCGGCGCAA TGTCGGGCGG GCCGTCTTCT CCTCGATCGG GATCATGTCG GTCGGCTACG TGCTGTTCGC CTACGCCACG GTCACCGGGT TCGGCTACGA CGCGGACAAG ACCGGCGCCG CCGCCGTGCC GTTCATCGAC GTCGCGCACG GGACCTTCGG CGTCCTGGCC TTCTTCGCCT ACATCGCCGG CCTGACCTCC ACCCTCGGCT CGCTGATCTC CGGCACGAAC TCCCAGACCC GGCTGCTGTT CAACGCCGGA CGCGAACGGC TGCTGCCGGC CTTCCTCGGC CGGGTGCACC CGACGCGGCG CACGCCGTTC AACGCCATCC TGGTCTTCGT CTCGGCGGCC CTGCTGATCA TCGGCGGCTG GGGACTGCTG CACATCGTCG GCGGCAAGGG GACGATGGAC CCGGTGTCCT TCTTCGCCGA GTCCTCGACG ATGGGCACGA TCCTGATCCT GCTGGTGTAT CTGGCCTCGA ACGTCGCGCT GCCGTTCTAC TACCGCCGGT ATCAGCGCTC TGAGTTCCGC GTCGTGCGGC ACGCGGTGCT GCCGCTGATC GGCGCAGCGG CGATCGTCGT GCCGCTGTAC TACCTGGCCA AGCCGGGGCA GTCCACGCCG TATGACTGGT TCCCGTACCT GGCACTCGGC GTGCTGGCGG TGGCGCTGGT GTACGCGGTG ATCCTCACGC GCCGCGATCC CGGTCTGGGA GAACGGGTCG GGGCGATCGT CGCCGACGCG GAGTGA
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Protein sequence | MSTMDSPSTV PAPAPAAPGP GDDRLRGGSL SLLDIASSTM ANIGPAMSFY FGFGLLATTA GVASPLTIVV AGLTVALLGN TLAQFSRAHP SAGGFITFVG KTFGPTSAVT TALLITAGYI IAISSVIAIS GGFLSMTLNY YFGWNVPWFL FTLVLTALAV TLIIRGIGVS TKLAGYFFAV EMLVLVVVSV ATIAKHGAHL SIKPFTPSHV KGGMSGLAEG FPLAVYMFVG WENSAALAEE TENPRRNVGR AVFSSIGIMS VGYVLFAYAT VTGFGYDADK TGAAAVPFID VAHGTFGVLA FFAYIAGLTS TLGSLISGTN SQTRLLFNAG RERLLPAFLG RVHPTRRTPF NAILVFVSAA LLIIGGWGLL HIVGGKGTMD PVSFFAESST MGTILILLVY LASNVALPFY YRRYQRSEFR VVRHAVLPLI GAAAIVVPLY YLAKPGQSTP YDWFPYLALG VLAVALVYAV ILTRRDPGLG ERVGAIVADA E
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