Gene Caci_3274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3274 
Symbol 
ID8334627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp3611932 
End bp3612633 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content73% 
IMG OID644956419 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003114022 
Protein GI256392458 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.570938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG ACCGATCCGC CGCGGAGAAC CCCAGGTCAG CGCCCGCGTC CCGACCCCCA 
GTCCGGCGCC CCCGCGGCGC CGTCCGCGAG GGCCTGATCG AAGCGGGTCT CGAACTGGCC 
CGCACCGGCG GTCCCGACGC GGTGGTCCTG CGCGAGGCGA CCCGGATCGT CGGCGTGGTC 
CCCAACGCCG CCTATCGCCA CTTCGCCGAC CGCGACGAAC TCCTGGCGGC GGTCTGCACC 
GCGGCGATGG CCGAACTCGG CGCCCGCATC GCCGCCGCCA TCGCCCGCGT CCCTGGCGAC 
CACGGCGATC CTGACGGCGC CTTCGGCCGT ATGGGAGCGG TGGGCACTGC GTACCTGGAG 
TTCGCCCGCG ATGAGCCAGG ACTGTTCGCG ACGGCCTTCG CGGTCCCGGA TCAGCACCCG 
TATGTCGTCG CGAGCGGCGC ACGCGGCGCC GACGGCAGCC CTCTGAGCCA GCTCCAGGAG 
GTGCTGGACG AACTGGTCGA GGTCGGCCTG TTGGATCCGC GCCGCCGTGA GGGCGTCGAG 
GTCCCGGTGT GGTCGACGGT GCACGGCCTG GCGGTCCTGA TCGGGCAGGG CCCGCTGCGG 
GTGCTGCCGG ACGGGGATGT GCGAGCGTTG ACGGAGCGGG TACTGAGATT TATCGCCGAG 
AGCCTTCTTG CGCCGGGGGA GAAGACGATC AGCGCTCCGT GA
 
Protein sequence
MSTDRSAAEN PRSAPASRPP VRRPRGAVRE GLIEAGLELA RTGGPDAVVL REATRIVGVV 
PNAAYRHFAD RDELLAAVCT AAMAELGARI AAAIARVPGD HGDPDGAFGR MGAVGTAYLE 
FARDEPGLFA TAFAVPDQHP YVVASGARGA DGSPLSQLQE VLDELVEVGL LDPRRREGVE 
VPVWSTVHGL AVLIGQGPLR VLPDGDVRAL TERVLRFIAE SLLAPGEKTI SAP