Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3271 |
Symbol | |
ID | 8334624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3609084 |
End bp | 3610796 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644956416 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003114019 |
Protein GI | 256392455 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.469409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTCG CCACGGCCGT GGAGCCGGCC GCCGCCGACA AGCGCTACCA GCGGGTCGCG CTGACCAACA CCACCACGGC GATGTTCATG TCGGCGCTGG ACGGCTCGAT CGTGTTGATC GCGCTGCCGC CGATCTTCCG AGGCATCCAC CTGGACCCGC TGGCGCCCGG GAACATCGCC TACCTGCTGT GGATGATCAT GGGGTACCGC CTGGTGCAGG CGGTGTTCGT GGTCACGCTC GGCCGCCTCG GCGACATGTT CGGCCGGGTG CGCACGTACA ACGCCGGGTT CATGGTCTTC ACCATCGCCT CAGTGCTGCT GTCCTTCGAT CCCTTCGTCG GGACGCACGG CGCGATGTGG CTCATCGGCT GGCGATTGCT ACAGGCCATC GGCGGCTCGA TGCTGACGGC CAACTCCGCG GCCATCCTCA CCGACGCCTT CCCGCCCGAC CGGCGCGGGT TCGCCCTGGG CATCAACCAG ATGGCGGCGC TGGCCGGGAT GTTCATCGGG CTGGTGGCCG GCGGGCTGCT TTCGGCGTGG GACTGGCGCG CGGTGTTCTG GGTGAACGTG CCGGTCGGGA TCTTCGGGAC GTACTGGGCC TATCGGCGGC TGCGCGAGAC CAGCCGCGCC ACCGGCGGGC GGATCGACTG GTGGGGCAAC GTCACCTTCG CCGTCGGGCT CGGCTCGGTG CTGATCGGCG TCACGCAGGG CCTTCAGCCG TATCAGGGGC ACGCCATGGG CTGGACGAAC CCGACGGTGA TCACGCTGCT GGGCGTGGGA CTGGCCGGTC TGATCGCGTT CTACCTCATC GAGTCCCGGA TCGCCGAGCC GATGTTCGAC CTGTCGCTGT TCAAGATCCA CGACTTCACG GTCGGCAACT CCGCCTCGCT GGCGATCTCG GTGGCGCGCG GCGGGCTGCA GTTCGTCCTG GTCATCTGGT TGCAGGGCAT CTGGCTGCCG CTGCACGGCT ACGACTACAG CGACACGCCG TTGTGGGCCG GCATCTTCCT GCTCCCGATG ACCGTCGGCT TCCTGATATC CGGGCCGGTG TCGGGCTATC TGTCCGACCG CTTCGGCTCG CGCGGGTTGT CGACAGCCGG CGCGGCGGTC TTCGGTTCCA GCTTCATCGG TTTGATTCTG CTGCCTGTGC AGTTCCCTTA CTGGGCTTTC GCCTCGTTGA TCGCCATCAA CGGGATCGGC AGCGGGATGT TCGGCGCACC GAACACGTCC TCCATCATGA GCAGCGTGCC GGCCAGCAAG CGCGGCGCGG CTTCGGGGAT GCGCGCCACG TTCCAGAACT CCGGTACCGC GGTGTCGATC GGCGTGTTCT TCTCGCTGAT GATCGCCGGG CTCGCCGCGA AGCTCCCGCA CACGCTCACC ACCGGCTTGC AGCAGCAGGG GGTGTCGGCG CACGCCGCCG CGCAGATCGG GCAGCTGCCG CCGGTGTCCT CGCTGTTCGC CGCGATGCTG GGCGTCAACC CGGTGCAGCA CCTGCTGTCC GGGGTCGGCG CGCTGAACTC GCTGACCCCC TCGGCGCAGG CCACGCTCAC CGGGCGCGAG TTCTTCCCGA ACCTGCTGTC AGGGCCCTTC CACCAAGGGC TGATCATCGT GTTCTCGGTC GCCACCGGGC TCGCGGCGCT GGCGATGATC GCGTGCCTGC GGCGCGGCAA GGGACGCCCC GTCAGGGAGG AAATCGCCGA CAGCGCCGGC TGA
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Protein sequence | MAVATAVEPA AADKRYQRVA LTNTTTAMFM SALDGSIVLI ALPPIFRGIH LDPLAPGNIA YLLWMIMGYR LVQAVFVVTL GRLGDMFGRV RTYNAGFMVF TIASVLLSFD PFVGTHGAMW LIGWRLLQAI GGSMLTANSA AILTDAFPPD RRGFALGINQ MAALAGMFIG LVAGGLLSAW DWRAVFWVNV PVGIFGTYWA YRRLRETSRA TGGRIDWWGN VTFAVGLGSV LIGVTQGLQP YQGHAMGWTN PTVITLLGVG LAGLIAFYLI ESRIAEPMFD LSLFKIHDFT VGNSASLAIS VARGGLQFVL VIWLQGIWLP LHGYDYSDTP LWAGIFLLPM TVGFLISGPV SGYLSDRFGS RGLSTAGAAV FGSSFIGLIL LPVQFPYWAF ASLIAINGIG SGMFGAPNTS SIMSSVPASK RGAASGMRAT FQNSGTAVSI GVFFSLMIAG LAAKLPHTLT TGLQQQGVSA HAAAQIGQLP PVSSLFAAML GVNPVQHLLS GVGALNSLTP SAQATLTGRE FFPNLLSGPF HQGLIIVFSV ATGLAALAMI ACLRRGKGRP VREEIADSAG
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