Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3198 |
Symbol | |
ID | 8334551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3526162 |
End bp | 3527121 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644956343 |
Product | ABC-3 protein |
Protein accession | YP_003113946 |
Protein GI | 256392382 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0525861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGCA TGTTCAGCCA CCCGTTCATG GTCTACGCGC TGCTCGGCGG GACCGGCATC GCGGCGGCCT GCGGGGCGGT CGGGTTCTTC CTGGTGCTGC GCGCGCAGGT GTTCACCGGG GACGCGCTGT CGCATGTGGC GTTCACCGGA GCGCTGGCCG CGCTGGCGTT CGGCGTCGAT CTGCGCATCG GCCTGTTCAC CGCGACGATC GCCGTGGCGC TGCTGCTCGG CGCGCTGGGG CGGCGCGGAC GGGCCGACGA CGTGGTGATC GGCAACGTCT TCGCCTGGAT TCTCGGGCTC GGCGTCTTCT TCCTCACGAT GTACACGACC AACCGCTCGG GCTCCGGTTC CGGCAACGGC TCGGCGACGA TCAACGTGCT GTTCGGCTCG ATCCTCGGTC TGTCCTCATC GCAGGCGCAG ACCGCGTTGT GGATCGGGCT CGGTGTGGTC GCGGTCCTGC TGTTCATCGC CCGACCGCTG CTGTTCGCGA CGTTGGACGA GGCTGTGGCC GCCGCGCGCG GCGTGCCTGT CAGGGTTCTG GCATTCGTGT TCCTGGCTCT GGTCGGCGCG GCGACTGCGG AGGCGACGCA GGCGGTCGGT GCGTTGCTGC TGCTGGGGCT GGTCGCGGCG CCTGCCGGTA CCGCGCTGGT GCTGACCGAC CGGCCGTTCC GCGGGCTGGG CGTGGCGATC GTGCTGGCGG TGGGGGAGAT GTGGGTCGGG TTGACGCTGG CCTATCTCGT GCCGCGGATG CCGCCGAGCT TCTCCATCAC GGCGGTCGGG ACTTTCGCGT ACGCCGCCGC CATGATCTAC CGGTCGGTCA ACCGACGCCG CGCGGCGGTT CCAGCCTCAG CTGCCTCGAC CGCCAGCCCC GTTTTCCCAT CCCCTTCGCG TGTACGTCTG CGCCCCAGCA CCGCCAGCAC CACCACGCAC AACACCGCCG CACCCCACGC GAAGTACTGA
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Protein sequence | MISMFSHPFM VYALLGGTGI AAACGAVGFF LVLRAQVFTG DALSHVAFTG ALAALAFGVD LRIGLFTATI AVALLLGALG RRGRADDVVI GNVFAWILGL GVFFLTMYTT NRSGSGSGNG SATINVLFGS ILGLSSSQAQ TALWIGLGVV AVLLFIARPL LFATLDEAVA AARGVPVRVL AFVFLALVGA ATAEATQAVG ALLLLGLVAA PAGTALVLTD RPFRGLGVAI VLAVGEMWVG LTLAYLVPRM PPSFSITAVG TFAYAAAMIY RSVNRRRAAV PASAASTASP VFPSPSRVRL RPSTASTTTH NTAAPHAKY
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