Gene Caci_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3197 
Symbol 
ID8334550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3525251 
End bp3526165 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content68% 
IMG OID644956342 
ProductABC-3 protein 
Protein accessionYP_003113945 
Protein GI256392381 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0514778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACTG ACTCCGGACT GTCCTGGAAC CCCGTCACCG ACATCGACCA GATGTGGCAG 
CTGGACTCGA TGGTCAGCGC CTACCGCGCC GGCACGATCG TCGCCGTCCT GGCGGCCGTC
GTCGGCTGGT TCATGGTGCT GCGGCGGCAG ACGTTCGCCG GGCACACGGT CGCCCTGGCC
GGGTTCCCCG GCGCTGCGGC GGCTGTCTTT CTCGGTGTCA GCGCGTCGTG GGGTTACTTC
GGGTTCTGCA TCGGCGCCGG CGCGGTCATC GCGGCGTTGG CGCGCAACGG CAAGGGCGGT
ATGGCCGAGG AGTCCGCGCT CACCGGGATC GTGCAGTCCT TCACGCTGGC GTGCGGGATG
CTGTTTGTCG CGCTGTACAA GGGATTCCTC AACGGTGTGA ATTCCCTGCT GTTCGGCAGC
TTCCTCGGCG TCACCTCCGG GGACATCGCA GTGCTGGCGG CGGTCGCCGC CGTGGTGCTG
ATCGTCATGG CCCTGATCGG ACGGCCGCTG CTGTTCGCCT CGGTCGATCC GTCGGTCGCC
GACGCCCGGG GTGTTCCGTC GCGGATGTTG GGCGTGCTGT TCCTGGTCGT GTTGGGCGCC
ACGACCGCCG AGGTATCGCA GATCACTGGT TCGTTGCTGG TGTTCGCGCT GTTGGTGATG
CCCGCCGCGA CGGCGCAGCG CGTCACCGCA CGCCCCGCGC TGAGCCTGGT CCTGTCGGTG
CTGTTCGCGC TGGCGGTGAC GTGGTTCGGG CTCGGGGCGG CGTACTTCTC GCCGTATCCG
ATCGGGTTCT GGATCACCAC GTTCGCGTTC GGTTGCTACC TGCTGGCGAA CGTCTACGGA
TTCTTTGCGC GGCGGCGCGG AACTGGCCGC CGCCGCGTTG CGGAAGTAGC GATGACAGTC
TTGGGGGCGT CATGA
 
Protein sequence
MPTDSGLSWN PVTDIDQMWQ LDSMVSAYRA GTIVAVLAAV VGWFMVLRRQ TFAGHTVALA 
GFPGAAAAVF LGVSASWGYF GFCIGAGAVI AALARNGKGG MAEESALTGI VQSFTLACGM
LFVALYKGFL NGVNSLLFGS FLGVTSGDIA VLAAVAAVVL IVMALIGRPL LFASVDPSVA
DARGVPSRML GVLFLVVLGA TTAEVSQITG SLLVFALLVM PAATAQRVTA RPALSLVLSV
LFALAVTWFG LGAAYFSPYP IGFWITTFAF GCYLLANVYG FFARRRGTGR RRVAEVAMTV
LGAS