Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3107 |
Symbol | |
ID | 8334459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3416292 |
End bp | 3416963 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644956254 |
Product | riboflavin synthase, alpha subunit |
Protein accession | YP_003113857 |
Protein GI | 256392293 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0307] Riboflavin synthase alpha chain |
TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.409641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCACAG GCATCGTCGA AGAGCTCGGC CGGGTCGTCG CGCTGGAAGC CGACGGCGAC TCCGCGCGGC TGCGCGTGGC CGGATCGCTG GTCACCTCGG ACGCCGAGCA CGGCTCCTCG ATCGCCGTCA ACGGCGTCTG TCTGACCGTC ATCGAGTCCG GGGACCAGGC CGCGAAGGCC GGGGAGTTCA CCGCGGACGT GATGGCCGAG ACCTTGGACA AGTCCAATCT GGGCGACTTG AAGCCCGGCG ATCCTGTGAA CCTGGAACGT CCGATGAAGC TCGGCGCGCG TCTGGGCGGA CACCTGGTGC AGGGGCATGT GGACGGTGTC GGCGTCGTCT TGGAGCGCAT CCCCGGCGAG CACTGGGAGG TCGTCCGGGT CTCGCTGCCC TCGGCGCTGT CCCGGTATGT CGTCGACAAG GGTTCGATCA CCGTGGACGG CATCTCGCTG ACCGTGGTCG AGGCCGCCGC CGACTCCTTC ACGGTCAGCC TGATCCCCAC CACGCTGGAG CTGACGACGC TGGGCAGCAA GGGCCCCGGC GCGGCGGTGA ACCTGGAGAT CGACGTCATC GCGAAGTACA CCGAGCGGCT GCTCGGGCTC GACGGCGCCG CCGCCGGGCA GTCCGAGAGC GGTTCCGCCG CTGACGCCAC CTCGAAGGAG GTCACGGCAT GA
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Protein sequence | MFTGIVEELG RVVALEADGD SARLRVAGSL VTSDAEHGSS IAVNGVCLTV IESGDQAAKA GEFTADVMAE TLDKSNLGDL KPGDPVNLER PMKLGARLGG HLVQGHVDGV GVVLERIPGE HWEVVRVSLP SALSRYVVDK GSITVDGISL TVVEAAADSF TVSLIPTTLE LTTLGSKGPG AAVNLEIDVI AKYTERLLGL DGAAAGQSES GSAADATSKE VTA
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