Gene Caci_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3017 
Symbol 
ID8334368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3339492 
End bp3339902 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content68% 
IMG OID644956163 
Producthypothetical protein 
Protein accessionYP_003113767 
Protein GI256392203 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.196092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.052376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG TCCGTGCCCT GACGATCCGC CAGCCGTGGG CGGCGCTGAT CGCCCACGGC 
ACCAAACGCG TCGAGAACCG CACCTGGGGC ACCGCCTGGC GCGACACCTT GCTGATCCAC
GCCGCCAAGC AGGCCGACCC GTACCCGGCC AGCGTGACGC TGGTAGACGG CGCCGACGTC
CGGTCTTCGA TCATTGCCGT CGCCACCCTT GCCGACATCC ACGTCTGCAA CGGCAAGTGC
AGCCCGTGGG CCGAGGCCGG ATGTCACCAC TGGGTGCTGT CCGATGTGCG TCCGTTGGCC
GAGCCGGTGC TGTGCAAGGG CGCGCAGGGG CTGTGGCGTC CGCATCTCAC GCAGGACGCG
CGGCGAGATC TGCACATCGA CTTTCCCGAA GGAGACCAGA GCGATGACTG A
 
Protein sequence
MTDVRALTIR QPWAALIAHG TKRVENRTWG TAWRDTLLIH AAKQADPYPA SVTLVDGADV 
RSSIIAVATL ADIHVCNGKC SPWAEAGCHH WVLSDVRPLA EPVLCKGAQG LWRPHLTQDA
RRDLHIDFPE GDQSDD