Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2896 |
Symbol | |
ID | 8334246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3285479 |
End bp | 3286021 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644956041 |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_003113646 |
Protein GI | 256392082 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.407099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.176429 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACT TTGAGCCGAT CTTCCGTGAC GCCAACGCCC GCCTGTCCGC CGAGCCGCGC ACCGCAGGCA AGTCCGTATG GTCCGCCGAT GCCGGCGACC GCCAGTTTGA GGTTCTCGAG TTGGCCGTCA CCTATGCAGA AGACGCGGGA GACGAAGACG CCGCCGATCT CGGCAGGAAC GCGATCGTCC GTGACCGCGT CTACGCGGTG GACGGCAAGC GCGTCTGCTG GGCCCGTTCC TACCTGCCGG CGAAGCTCGC CGAGGGCACG CCGATCGGAG GCTTGAACAC CGGCCCCGGT GGCGTCCCGG CGCGGCTGGC TGAACTCGGG CACGAGCTGG TTTCGTTTTC CGAGGACGTT GAGTTCGTTG AGCGTGAGAA CGTGACTGCC GATGAGCGGG ACAGGCTCGG CATCGACGAC ATGACTGCGG TGGTGCGGAT TGTGCGGCGC GGCATCGACG CATCCGGGCA GGTGGTTAAG GTGTCGGACA TGCGGCTGGT TGCCGGCGCG TATCGGTTCC GCTGGGCCTG GACGAACCGC TGA
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Protein sequence | MTDFEPIFRD ANARLSAEPR TAGKSVWSAD AGDRQFEVLE LAVTYAEDAG DEDAADLGRN AIVRDRVYAV DGKRVCWARS YLPAKLAEGT PIGGLNTGPG GVPARLAELG HELVSFSEDV EFVERENVTA DERDRLGIDD MTAVVRIVRR GIDASGQVVK VSDMRLVAGA YRFRWAWTNR
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