| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2775 |
|---|
| Symbol | |
|---|
| ID | 8334124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3185508 |
|---|
| End bp | 3186392 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644955923 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_003113529 |
|---|
| Protein GI | 256391965 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGCC CCACACTCCG TACCGCGCTC GCCCTCGGTG CCGGAGCCGC CCTGGCCCTG
GCTGCCGCCG CGTGTTCACC GGCGAGTTCG AAGCCTGCCG CGACCGGGAC GAGTACCGGG
TCTGGTGCCC CCGACTGCTC GCCCGCGACC TTGCACCTGG TCGCCAAGGG CACGCTCACC
ATCGCCACCG ACACCCCGGC CTACGCGCCC TGGTTCGACA ACAACACCCC GTCCGACGGC
AAGGGTTTCG AGAGCGCTGT GGCCTACGCG GTCGCCGCGA AGCTCGGCTT CACGCAGAGC
CAGGTGAAGT GGGTCACCGA GCCCTTCGAC AACAGCTACG CGCCGGGCCC GAAGAACTTC
GACTTCGACC TGAACCAGAT CTCGATCACC GACGAGCGCA AGAAGGCCGT GGACTTCTCC
TCCGGGTACT ACACGGTCAC GCAAGGCGTC ATCACGTTGA AGACCTCGAA ATACGCCGGC
GCCACCTCCC TGGCGGGCTT GAAGCCGGCC AAGATCGGGG TTCAGGTCGG CACCACGAGC
ATGCAGGCCG TGCAGGGCAA GATCGCGCCC TCGCAGCAGC CTGCCGTGTT CACCACCACC
GACGACGAGG TCAACGCGCT CAAGAACGGC CAGATCGACG CGCTGGTCAC CGACCTGCCG
ACCGTGTTCT ACCTCACCGC CTCCTCGATC GACAACGGCA AGGTCGTCGG GCAGTTCGAC
TACACCGACT CCGGTGTCGA GCAGTTCGGT GCGCTGTTCG CTAAGGGCAA TCCGCTGGTC
GGCTGCGTCG ACGGCGCCAT CGATCAGCTC AAGTCCGGTG GCGAACTGGC CGCGCTCACC
ACGCAGTGGC TGTCCACGTC CGCGAACGCG CCGAAGCTCG GTTAG
|
|---|
| Protein sequence | MFRPTLRTAL ALGAGAALAL AAAACSPASS KPAATGTSTG SGAPDCSPAT LHLVAKGTLT
IATDTPAYAP WFDNNTPSDG KGFESAVAYA VAAKLGFTQS QVKWVTEPFD NSYAPGPKNF
DFDLNQISIT DERKKAVDFS SGYYTVTQGV ITLKTSKYAG ATSLAGLKPA KIGVQVGTTS
MQAVQGKIAP SQQPAVFTTT DDEVNALKNG QIDALVTDLP TVFYLTASSI DNGKVVGQFD
YTDSGVEQFG ALFAKGNPLV GCVDGAIDQL KSGGELAALT TQWLSTSANA PKLG
|
|---|
| |