Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2750 |
Symbol | |
ID | 8334099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3160018 |
End bp | 3161523 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644955898 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003113504 |
Protein GI | 256391940 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTCC ACGACGTCCT GTCCCGCGGT ACGCCGAATC CCCTACGCAA CCAGCGCGTC GTCATTCCGA TCATGTCCGT CTTCACCATC TTCATGGTGA TCGTCGACGG CTCGATCACC ACGGTGGCGC TGCCGTCGCT GGCGCGTCAG TTCCACCTGT CCCCCGCCGG CCTGGACGGC GTCGTCGTGA TCTATCCCAT CTGCCTGGGC ATGGTCATCC CCACCTCCGC CTGGCTGCTC GAACGCCACG ACGGCCGCCG CGTGCTGCTG CTCGGCCTGG CCCTGTTCAC CCTGGCCTCC GGGCTGTGCG GGGCTGCTGA GAACCTTCAG CAGCTGATCG TCTTCCGCGC CCTGCAGGGC CTGGCCGCCG GGGCGTTGAT GCCCGTCTCG CAAGCGCTGA TATTCAGGAC TTTCACGCAG CACGAACAGA TACGACTGTC CCGGATCACG ATCATCCCCC AACAACTGGC TCCGGCCATC GCGCCGTTGC TCGGCGGCTC ACTGGTGGTG GCCTTCAGCT GGCGCTGGGT CTTCTACGCA AACGTACCGG TCGGTCTGGC GGCCGTGGTG TTCGGGCTGC TCTTCCTCGG AGAGCACCGC GAGCACCGCG CCGCCCGGCT GGATCTGGCC GGCCTGCTGC TCAGCGCTGC CGCGATGGGC TCCCTGATGT ACGGGGTCTG CGCCGGCCCG GACCACGGGT GGGCCACACC GGCCGTTATC AGTGCGCTGA TGGGCGGTGC GGCGTTGCTC GGCCTGGCCA TACGCCACCA GTTGCGCACG GACCAGCCCG CGCTGCGGCT GCGATTGTTC GCAGACCGGC TCTTCCGCAA GGCCTGCCTG GTCGGCCTCG TCGGACTCAT TCCCACCATG GGCACCATGT TCCTGATCCC GCTGTTCCTC CAGCAGGCGC AGGGGCGCGA CGCCTTCGCC TCCGGCAGCG CGACCTTCAC CGAGGCCTTC GGCGTGTTGC TGACCATGCA GGCGGTCGGC GTCCTTTATC AGCGGGTCGG CCCGGGCCCG ATCATCGGGG GCGGGCTGCT CGGCGTGGCC GTCGTCGAGC TGCTGTTCGC GACCTGCGAC GCCGACACCG GGCTGTGGAC GCTGCGGCTC TACATGTTCC TGCTCGGCGT CATGATGGGC GCCTTCTTCA TCCCGGTCAC CCTGGCCTCA CTCACGACGC TCGACCGTGC CGACTCCGCC CAGGCTGCGA CCCTGGGCAC GGTCGTGCGG CAGTTCGGGA TGGCGCTGGC GCCGACCGTC GTCACCACCG TTCTCGTCCT CGACTCCGGC CACGGCGGCC ACGCCGATAT CTCGACGCCG GTGGCGGGAT ACCAGAAGGC GTTTCTCGTC CTCGCCGCGA TCGCGCTGTT CACCGGGCTT TACGCGTTCA GCTTGGGTCG CCAGCGTCGG ATGCCGGAGG CGGAGTCCAC CGGCACGGCG AATGTGCACG CCGCGGGCGC GGCGCAAGGA GTCCGTCAGG CCCTCACTGC CCGAACACCC GAATGA
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Protein sequence | MSVHDVLSRG TPNPLRNQRV VIPIMSVFTI FMVIVDGSIT TVALPSLARQ FHLSPAGLDG VVVIYPICLG MVIPTSAWLL ERHDGRRVLL LGLALFTLAS GLCGAAENLQ QLIVFRALQG LAAGALMPVS QALIFRTFTQ HEQIRLSRIT IIPQQLAPAI APLLGGSLVV AFSWRWVFYA NVPVGLAAVV FGLLFLGEHR EHRAARLDLA GLLLSAAAMG SLMYGVCAGP DHGWATPAVI SALMGGAALL GLAIRHQLRT DQPALRLRLF ADRLFRKACL VGLVGLIPTM GTMFLIPLFL QQAQGRDAFA SGSATFTEAF GVLLTMQAVG VLYQRVGPGP IIGGGLLGVA VVELLFATCD ADTGLWTLRL YMFLLGVMMG AFFIPVTLAS LTTLDRADSA QAATLGTVVR QFGMALAPTV VTTVLVLDSG HGGHADISTP VAGYQKAFLV LAAIALFTGL YAFSLGRQRR MPEAESTGTA NVHAAGAAQG VRQALTARTP E
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