Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2678 |
Symbol | |
ID | 8334027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3071641 |
End bp | 3072510 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644955829 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003113435 |
Protein GI | 256391871 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGACG CCGTCAAGCA CCGCTCGCCG ACAGCACCGC CCCGGTCCTT CATCTGGACC CGGCGCATCG CGCTGACACT GCTCGGACTG TTCACCGGCA TCCCGCTGTG GGTGATGGTG TCCAGCTCCG TGAAATCGCT GGTCGAGGTC CAGAACGCGT TCCACTGGCT GCCCACACAC CTGACGCTCA GCCCCTACAT CGACATGTGG AGCACCGTCC CGCTCGGGCA CTACTTCCTC AACAGCGCCA TCGTCGCCTC CTGCTCGACG GCGGTCTCGG TGGTGATCGC CGTCTTCGCG GCCTACGCCG TGTCCCGCTA CCGGTTCGCC GGCCGCAAGG TCTTCTCCGT CACGGTGTTG TCCACGCAGA TGTTCCCCGG CATCCTGTTC CTGCTCCCGC TCTACCTCAT CTTCGTGAAC ATCGGGAACA GCACCGGGAT CCAGCTCTCC GACACCCGGC TCGGCCTCAT CATCACCTTC CTGACCTTCA CCCTGCCGTT CTCCATCTGG ATGCTGGTCG GGTACTTCGA CTCCATCCCC CGGGACCTGG ACGAGGCCGC CTCCGTCGAC GGATCCGGCC CGATCAGCAC CCTGTTCAAG ATCCTCGTCC CGGCAGCCCT CCCCGGCATC GTCACCGTCG CGGTGTACTC CTTCATGACA GCCTGGGGCG AAGTGCTGTT CGCATCAGTG ATGACCGACG ACTCCACCCG CACCCTGGCC GTGGGCCTGC GCGACTACGC CTCGCAGAAC GACGTCTACT GGAACCAGAT CATGGCGGCG TCCCTGGTCG TCAGCATCCC GGTGGTCGCC GGATTCCTGC TCATGCAGAA GTACCTCATC GCCGGGCTGA CCGCCGGCGC GGTCAAGTAG
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Protein sequence | MSDAVKHRSP TAPPRSFIWT RRIALTLLGL FTGIPLWVMV SSSVKSLVEV QNAFHWLPTH LTLSPYIDMW STVPLGHYFL NSAIVASCST AVSVVIAVFA AYAVSRYRFA GRKVFSVTVL STQMFPGILF LLPLYLIFVN IGNSTGIQLS DTRLGLIITF LTFTLPFSIW MLVGYFDSIP RDLDEAASVD GSGPISTLFK ILVPAALPGI VTVAVYSFMT AWGEVLFASV MTDDSTRTLA VGLRDYASQN DVYWNQIMAA SLVVSIPVVA GFLLMQKYLI AGLTAGAVK
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