Gene Caci_2414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2414 
Symbol 
ID8333763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2731169 
End bp2732224 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content71% 
IMG OID644955567 
ProductRecB family exonuclease-like protein 
Protein accessionYP_003113173 
Protein GI256391609 
COG category[L] Replication, recombination and repair 
COG ID[COG2887] RecB family exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGA TGGACGCACC GGCGACGACG GGCCCTGTGA CGACGACGGC CGGCGCGCCT 
GATCCGGTGG TGGGGGCTGC CGCGACGGTG GGTGTTCCGG TGGCTGCCAC GACGGCTGTG
ACAGCGCCGG TTCCGGTGCC GGCCACGACG ACCGTGAACC TCCCGATGGC GCTCTCCCCG
TCCCGCGCGG CGGACTTCAT GACCTGCCCG CTGCTGTTCC GCTTCCGCGT CATCGACAAG
CTCCCGGAAC GCAAAAGCGC CGCCGCGACC CGCGGCACCC TGATCCACGC GGTCCTGGAG
CACCTCTTCG ACCTGCCGAC CGGCCAGCGC ACCCCGACCT CGGCCTCCGG CATGCTGTCC
CCGGAATGGG AGCGCATGGT CCAGGCGGAC CCGGAGCTGA AGGCGCTCGC CGAGGAAGCA
GGCGGCGACG AGGCGTGGCT CAAAGGCGCG GTAGACCTGC TGGAACGCTA CTTCCGCCTG
GAGGACCCGA ACCGCCTGGA GCCGGCGGAG CGCGAACTCT TCGTCCACGC CCGCATCGCC
GACGGCCTCC TCCTGCGCGG CTTCGTCGAC CGCCTCGACG TGGCGCCCAA CGGCGCGCTC
CGCGTGGTGG ACTACAAAAC AGGACGCGCC CCGGGCCCGG CCTTCGAAGG CAAAGCCCTG
TTCCAGATGA AGTTCTACGC CCTGGTCCTG TGGAAGACCC GAGGCGTGGT CCCCCGCCGC
CTGCAGCTGA TGTACCTCGG CGGCGAAAGC CAGATCGTCA CCTACGACCC CGACGAATCC
GACCTGCGCG CCACCGAACG CAAGGTGGCC GCCCTCTGGA GCGCCATCCG CGCGGCGGCG
GAGCGCGGCG AATGGCGCGC GAACCCCTCG CGCCTGTGCG ACTGGTGCGA TCACAAGGCC
CTGTGCCCTG AGTTCGGCGG CACGCCGCCG GTACTGCCGC CGGTGGAGCT GGTCGAGGCG
TCGGACGCGG TGCCGGGGCA GCGAGGTCGG AGCGCGGCGG GCACTGCGAC TGCGAGTGAT
GCCACAGTGA GTGAGCAGAG CGAACCAGAA GACTGA
 
Protein sequence
MDAMDAPATT GPVTTTAGAP DPVVGAAATV GVPVAATTAV TAPVPVPATT TVNLPMALSP 
SRAADFMTCP LLFRFRVIDK LPERKSAAAT RGTLIHAVLE HLFDLPTGQR TPTSASGMLS
PEWERMVQAD PELKALAEEA GGDEAWLKGA VDLLERYFRL EDPNRLEPAE RELFVHARIA
DGLLLRGFVD RLDVAPNGAL RVVDYKTGRA PGPAFEGKAL FQMKFYALVL WKTRGVVPRR
LQLMYLGGES QIVTYDPDES DLRATERKVA ALWSAIRAAA ERGEWRANPS RLCDWCDHKA
LCPEFGGTPP VLPPVELVEA SDAVPGQRGR SAAGTATASD ATVSEQSEPE D