Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2375 |
Symbol | |
ID | 8333724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2692398 |
End bp | 2693789 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644955528 |
Product | recombination factor protein RarA |
Protein accession | YP_003113134 |
Protein GI | 256391570 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGCAGC TGGACTTGTT CGAGGAGGCG GGCACCGAGA AGGCCAGGAA CGCGGCCCCG CTCGCGGTCC GCATGCGCCC TCGTGTCCTC GGCGAGATCG TCGGCCAGAA GCACCTGCTG CGGGCCGGCT CCCCGCTGTG GCGGCTGGTC GAGACCGGAG ACGGCGTGAC CGTGCCGTCC TCCATCCTGC TCTGGGGTCC GCCGGGCACC GGCAAGACCA CCCTGGCCTA CGTGCTGGCC AACGCCACCG AGCGCACCTT CGCCGAGCTG TCCGCGATCA ACGCCGGCGT CAAAGAGGTC CGCGCCGTCG TCGAGCGCGC CAAGCGCGAG CTCGGCATGT ACGGCCGCGA GACCCTCCTG TTCCTCGACG AGATCCACCG CTTCTCCAAA GCCCAGCAGG ACTCCCTGCT CCCCGCCGTG GAGAACCGCT GGGTCACCCT GGTCGCCGCG ACCACCGAGA ACCCGCACTT CTCGATCATC TCCCCGCTCC TGTCCCGCTC CCTGCTGCTG ACCCTGCAGC CGCTGACCGA GGACGACGTC CGCGAGGTGA TCCACCGCGC GCTGGAGGAC GAGCGCGGGC TCGACGGCAA GGTCGCGCTC CCGCAGGACT CCGAGGAGCA CCTGCTCCGC ATCGCCGGCG GCGACGCCCG CCGCGCCCTC ACCGCGCTGG AAGCCGGTGC GGCCGGGGCG CTCGCGGCGG CCAAGGGCGA CGGCCCGGCC GAGCTGACCC TGGAGATCAT GGAGCAGGCG GTCGACCGCG CCGCCGTCCG CTACGACCGC GACGGCGACC AGCACTACGA CGTCGCCAGC GCCTTCATCA AGTCGGTCCG CGGCAGCGAC GTGGACGCCG CCCTGCACTA CCTGGCCCGC ATGGTCGACG CCGGGGAGGA CCCGCGCTTC ATCGCCCGGC GCCTGGTGAT CTCCGCCAGC GAGGACATCG GCATGGCCGA TCCCAGCTCG CTGCAGGTGG CCGTGGCCGC GATGCAGGCG GTGTCCTTCA TCGGCTGGCC CGAGGCGCAG ATCACGCTGG CGCACGCGGT GATCCACCTG GCCCTCGCGC CGAAGTCCAA TTCCGCGGTG AAGGCCATCG GCGCGGCGCT GGAAGACGTG CACAAGGGAC TGGCCGGTCC GGTCCCGCCG GGCATGCGTG ACTCTCATTA CTCCGGAGCC CAGACGCTCG GCCACGGAAA GGGCTATATC TATGCCCACG ACGTCCCCGG CGGCGTGGCG GCACAGCAGT ACGCCCCCGA CACCGTGAAG GACCGCCGTT ACTACGAGCC CACCCGGCAC GGCGCGGAGG CCCGCTACTC CGACGTCTAC GACCGTGTCA GAGCCTTGCT GGAGGGCGCC GGCGCCGCCA AACCACCGGG CGCCGAGACC GAAGCCTCCT GA
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Protein sequence | MEQLDLFEEA GTEKARNAAP LAVRMRPRVL GEIVGQKHLL RAGSPLWRLV ETGDGVTVPS SILLWGPPGT GKTTLAYVLA NATERTFAEL SAINAGVKEV RAVVERAKRE LGMYGRETLL FLDEIHRFSK AQQDSLLPAV ENRWVTLVAA TTENPHFSII SPLLSRSLLL TLQPLTEDDV REVIHRALED ERGLDGKVAL PQDSEEHLLR IAGGDARRAL TALEAGAAGA LAAAKGDGPA ELTLEIMEQA VDRAAVRYDR DGDQHYDVAS AFIKSVRGSD VDAALHYLAR MVDAGEDPRF IARRLVISAS EDIGMADPSS LQVAVAAMQA VSFIGWPEAQ ITLAHAVIHL ALAPKSNSAV KAIGAALEDV HKGLAGPVPP GMRDSHYSGA QTLGHGKGYI YAHDVPGGVA AQQYAPDTVK DRRYYEPTRH GAEARYSDVY DRVRALLEGA GAAKPPGAET EAS
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