Gene Caci_2364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2364 
Symbol 
ID8333713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2681182 
End bp2681877 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content70% 
IMG OID644955517 
Productbeta-lactamase domain protein 
Protein accessionYP_003113123 
Protein GI256391559 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTGTCG CCGGATTCCC AGCCGGAAGC CTGGGTGCGA ACTGCTATCT CGTGGCGCCC 
GCCGCCGGCG AGCAGTGCGT GATCATCGAT CCCGGCGAGG ACGCCGTCCC CGGGGTCGAG
GACGCCGTCC GGGAGCACGG GCTCCAGCCG GTCGCGATCC TGCTGACCCA CGGCCACGTC
GACCACACGA TGAGCGTGGT CCCGGTCTGC GGCGACTACG GCGTCCCGGC CTACATCCAC
CCCGGCGACC GCGAGATGCT CACCGACCCG CAGAAGTGGC TGGGCATCGC ACCGGGCACG
AAGGTCTTCG GACAGTCGAA GTTCGTCGAG CCCTCCGACG TCAAGGAGCT CACCGACGGC
GTCGTGCTGA ACCTGGCCGG TCTGGAGATC ACCGTCGACC ACACCCCGGG CCATACCAAG
GGCTCGGTGA CGTTCCGGAC TCCCGAGCAG CAGGACATCC CGCAGGTGCT CTACACCGGG
GATCTCCTGT TCGCCGGAGC GGTCGGCCGC TGGGACCTGC CCGGCGGCGA TCGCGACGAG
TTGCTGGCGT CACTGGCCCG CGTCTGCCTG CCGCTGCCGG ACGAGACCGT CGTCCTGTCC
GGCCACGGCC CCCAGACCAC GATCGGCCGC GAGCGCGCCA CGAACCCGTT CTTGACGGAA
GCCGCGCCGC TGTCGGTCAA ACCCCGCGGC TTGTAG
 
Protein sequence
MLVAGFPAGS LGANCYLVAP AAGEQCVIID PGEDAVPGVE DAVREHGLQP VAILLTHGHV 
DHTMSVVPVC GDYGVPAYIH PGDREMLTDP QKWLGIAPGT KVFGQSKFVE PSDVKELTDG
VVLNLAGLEI TVDHTPGHTK GSVTFRTPEQ QDIPQVLYTG DLLFAGAVGR WDLPGGDRDE
LLASLARVCL PLPDETVVLS GHGPQTTIGR ERATNPFLTE AAPLSVKPRG L