Gene Caci_2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2324 
Symbol 
ID8333673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2632533 
End bp2633120 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content73% 
IMG OID644955477 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003113083 
Protein GI256391519 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCCA ACAGTCCGCT GACCTCCGAG CGCATCCTGG AGGCGGCGGA GGAAACCCTG 
CGCCGCTTCG GTCCGGCCAA GACCAGCGTG GTCGACGTCG CGCGGGCGCT CGGCGTCAGC
CACGGGTCGG TGTACCGGCA CTTCCCGACC AAGGCAGACC TGCGCGACGC CGTGGTCGAC
CGCTGGCTGC AGCGGATGCA TCCCGCGCTG GCGGCGGTCG CCGGCGGTGC GGGGGACGCC
GCCGAGCGCG TGCGGCTGCT GCTGTGGACG CTGGCGGAGA CCAAGTGGAC CCGGGCGCAG
GACGACCCGG AGTTCTTCGC CGCGTTCGCC GAACTGGCCG AGGAGGCGCG CACCCCGGTG
GTGGCGCACA TCGACTTCGT CGTGGACCAG CTGACCAGTG TCATCACTGA GGGCGTCGCG
CGAGGCGAGA TCGCTTCGGC GGACCCGAAG ATGACGGCGC TGGCGGTGTT CGACGCCATG
GCCAAGTTCC ACAACCCGGC GGCGCGCGCG GAGTGGCAGC GCCCGGCCAT CGACACGGCC
TTCGCCGGCG TCTGGGCTCT GCTGCGGGAC GGTCTGCTGC CGCGCTGA
 
Protein sequence
MSPNSPLTSE RILEAAEETL RRFGPAKTSV VDVARALGVS HGSVYRHFPT KADLRDAVVD 
RWLQRMHPAL AAVAGGAGDA AERVRLLLWT LAETKWTRAQ DDPEFFAAFA ELAEEARTPV
VAHIDFVVDQ LTSVITEGVA RGEIASADPK MTALAVFDAM AKFHNPAARA EWQRPAIDTA
FAGVWALLRD GLLPR