| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2284 |
|---|
| Symbol | |
|---|
| ID | 8333633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2590302 |
|---|
| End bp | 2591048 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644955437 |
|---|
| Product | Methyltransferase type 12 |
|---|
| Protein accession | YP_003113043 |
|---|
| Protein GI | 256391479 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTCG AAGACGTCGT CGGACCGGCC ACGCACATGG TGTTCCGCTC GCCGATGACC
GAGGAGCGCG CGAACCGGAT CGCCGCGGAT CTGGCGGCTA CGGGACCGGC GACGGTCGCC
GACTATGCGT GCGGCTGGGG CGAGTTGTTG TTGCGGGTCC TGGCATTGGC GCCTTCCGCG
CGGGGATTCG GCGTGGACAT GTCGGCACGG GATCTGGAAC GGGGACGGGC CAACGCCGCG
GCGCGCGGGC TCGGCGATCG GGTCGAGTTC ATCGACGCGC CGGCTCGCGA CCATATGCGG
CCCGCGGATG TGGTGATCAA CAGCGGTGCC TGGCAGGTGT TCGCCAAAAC AGTGCCGCAG
GCGCTGGAGG TGTTGCGTCC GTTGGTGAAT CCCGGCGGGC GGCTGTTCTT CGGCGTCGAG
CACTGGGAGA GCGTGCCGCC GCCGGAGCGG CTGGCCGCGA TGTGGCCGGG GACCACGGCC
GACCGCTACG AGCTGCTGCC GGACATCGTC GACCACGTCG TCGCCGCCGG ATTCCGGCCG
CTGCGCGTCG AATCGTCGAC GCGCGCGGAG TGGGAGGACT ACGAATCGCT GGAGACCAGG
GACTCCGAGG AGTGGCTGCT GGCCAATCCG GGCCATCCGG ACGCCGCCGA GGTGCGCGAT
CAGCTGGATA ACAAACGAAG CATCTGGCTG CGCGGACACC GCGATTACTT CGGATTCGCC
ATGCTCACAC TGGGTGTTCC GGCGTAG
|
|---|
| Protein sequence | MTVEDVVGPA THMVFRSPMT EERANRIAAD LAATGPATVA DYACGWGELL LRVLALAPSA
RGFGVDMSAR DLERGRANAA ARGLGDRVEF IDAPARDHMR PADVVINSGA WQVFAKTVPQ
ALEVLRPLVN PGGRLFFGVE HWESVPPPER LAAMWPGTTA DRYELLPDIV DHVVAAGFRP
LRVESSTRAE WEDYESLETR DSEEWLLANP GHPDAAEVRD QLDNKRSIWL RGHRDYFGFA
MLTLGVPA
|
|---|
| |