Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2127 |
Symbol | |
ID | 8333472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2413228 |
End bp | 2414073 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644955277 |
Product | Glutaconate CoA-transferase |
Protein accession | YP_003112887 |
Protein GI | 256391323 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGGTCA CCGAGTCCAC TGCCGACGCT GGTGCTGGCA CCGGTGCCGA CGCCCCGCCT CTCTCCGCGC TGCCCCGCGA GCTGCTGGTG TTCGAGGGCG CGCGGCAGAT CGCCGACGGC GACTGCGTGA TCGCCGGTAC CGGGCTGCCG CTGCTGGCCG GGCTGGTCGC GCAGCGCACG CACGCGCCGA GCGCGCGGCT GTTGATCGAA TCAGGGGTCG TGTTCCCGAA GGTGGTGCCC ACGCCGCTGT CGGTGGTGGA CCCGCGGATC ATGCACGCGC CGTCCAAGCT CGGCTCGCTC ATCGAGTCCC TCGGCGGATT CGTGCAGCGC GGGCTGGTCT CCACCGGGTT CCTCGGCGGC GCGCAGATCG ACGCGCGGGC CAACATCAAC TCGACGTGGA TCGAGCGCGG CAGCGGCCGG GTGCGGCTGC CCGGCAGCGG CGGCGCGAAC GACATCGCCT CGCACTGCGC CACGATCGTG GTGCTCACCA GCCACGAGAA GCGGCGCTTC CCAGAGCGCT GCGACTACGT CACCTCGCCG GGCTTCCTGG ATGGTCCCGG CGCCCGCCGC CGTGCCGGGC TGAACCCGGT GCGGGTGAAG GTGGTCACCG ACCTGTGCGT GCTGGAGGGC GACGACGCGG TCGGGGAGCT GACCGTCACC GCGCTCATGC CGGGCGCCAC GGTCGAGGAC GTGCTGGCGA ACACCGGCTT CACGCCGCGG GTGGCCGACC GGCTCGCGGT CGTCGCCGCC CCTTCCGCCG AGCATTTGGC GCTGCTGCGC GACGTGCTCG ACCCCGAGTC CCGCTATTTT CCCGAGCGAC TGAAGAACGG AAACGCCCAT GACTGA
|
Protein sequence | MTVTESTADA GAGTGADAPP LSALPRELLV FEGARQIADG DCVIAGTGLP LLAGLVAQRT HAPSARLLIE SGVVFPKVVP TPLSVVDPRI MHAPSKLGSL IESLGGFVQR GLVSTGFLGG AQIDARANIN STWIERGSGR VRLPGSGGAN DIASHCATIV VLTSHEKRRF PERCDYVTSP GFLDGPGARR RAGLNPVRVK VVTDLCVLEG DDAVGELTVT ALMPGATVED VLANTGFTPR VADRLAVVAA PSAEHLALLR DVLDPESRYF PERLKNGNAH D
|
| |