Gene Caci_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2126 
Symbol 
ID8333471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2412290 
End bp2413231 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content69% 
IMG OID644955276 
Productcoenzyme A transferase 
Protein accessionYP_003112886 
Protein GI256391322 
COG category[I] Lipid transport and metabolism 
COG ID[COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCC GCGTGCATCA GCTTCTGAAT CCGCTGAGCC AGGCCAGGGT GATGAGCGCT 
GCCGAGGCGG TGCGGACCTT CGTCGAGCCC GGCGCCGTCC TGGGCCTGGG CGGCCAGAAC
ATCAACCGCT GTCCGATGGC GCTGGTGCAC GAGGTGGTGC GGCAGGACAT CGGGGATCTG
GCGGTCGTCG GCTGCAACCT GTCGCTGCCG CTGGACCACC TGGTCGCCGC GGGGCTCGTG
GCCCGCACCG AGCAGGGCAG CGGCAACCTG GAGAAGTTCG GCACGCTGTT CAGCTGGCGG
CGGGCCGTGG AGGCGAACCG CATCGAGGTG CGCGACTACT CACATCTGTC GATGGCGTCC
CGGTTTCTGG CCGGTGCCAT GGGATTGCCG TTCATGCCGG TGCGTTCGCT GCTGGGTTCC
TCAGTGCTCG AACGCCTCGT CGCCGAGGGG GACGCGGTGG TCACCGCCGA CCCTTGGAGC
GGCGAGCCGG TGGTGCTGGT GCGCGCCTGC ACGCCCGACG TTTCGCTGAT CCACGCCAAC
GCCGCCGACA CCGACGGCAA CGTGGTCATC GACGGGGTGA CGAGCCATGA GGTGGACATG
GTCCGGGCCT CGCGGCATGT GATCGTCTCG GTGGAGGAGG TGCTGCCGGC CGGGGCGTTC
GACGACCAGC CTGAGCGGGT CACGATCTCG GGGGCGTACG TCAGCGCGGT CGTCGAGCAG
CCTTGGGGCG CTTGGCCGAC CAGCGTCTAT CGCCGTTACG ACTACTACGA ATCCGAGATC
GACGGCTATC AGAAGAGCGC CAAGGCCGGG GACGAGGGTC CGCGCCGGTA TCTGGCGGAA
CAGGTGAGGG CGCACGCCGA TTTCGACGGG TACCTGGCCG CGTCCGATCC CGGCGGATCG
TCGAGGGCTG CGATGGCTGA GCAGATGCGG AGCCTGTTGT GA
 
Protein sequence
MAVRVHQLLN PLSQARVMSA AEAVRTFVEP GAVLGLGGQN INRCPMALVH EVVRQDIGDL 
AVVGCNLSLP LDHLVAAGLV ARTEQGSGNL EKFGTLFSWR RAVEANRIEV RDYSHLSMAS
RFLAGAMGLP FMPVRSLLGS SVLERLVAEG DAVVTADPWS GEPVVLVRAC TPDVSLIHAN
AADTDGNVVI DGVTSHEVDM VRASRHVIVS VEEVLPAGAF DDQPERVTIS GAYVSAVVEQ
PWGAWPTSVY RRYDYYESEI DGYQKSAKAG DEGPRRYLAE QVRAHADFDG YLAASDPGGS
SRAAMAEQMR SLL