Gene Caci_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1922 
Symbol 
ID8333265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2177281 
End bp2178210 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content71% 
IMG OID644955071 
Productband 7 protein 
Protein accessionYP_003112683 
Protein GI256391119 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGG ATCAGGGCGG ACAGGAGCCG ACACCGGTGG CGGAAGCCGC GGAGGTGCAG 
GCCGCGGAGG TGCCGATCAG CGAGCAGTCG GCGCGCGACG TCTCGGGGTG GGGCGCGCTG
GGCGCGGTGA TCGTGCTCGC CGGGATCGCC ATCGCGGTGG CGGCGCTGAC CATGGACGCG
ACGCGCGCCT GGGCCGTTAT CCCGGGCGGC GCGGGCTTGT TCCTGCTGGT GGGCTTGACT
CCGGTCTCGC CGGGGCAGGC GCGCGTGGTC ACGCTGTTCG GCCAGTACGT CGGCACGATC
CGCACGACCG GGCTGCGCTG GGTGAACCCG CTGACCTCGC GGCGCCAGGT CTCCACCCGC
GTGATCAACA GCGAGACGGC GACGCTGAAG GTCAACGACG CCGACGGCAA CCCGGTCGAG
ATCGCGGCGG TCGTGGTCTG GCAGGTCCGG GACACCGCCA AGGCCGTGTA CGCGGTCGAC
GACTTCAACG ACTTCGTCGC CATCCAGACC GAGACCGCCG TCCGGCACAT CGCCGGCGGC
TACCCGTACG ACGCGCGCAC CGAGGGCCAG GTCTCCCTGC GCCAGAACGC CGACGAGATC
ACCGCCCGCA TGTCGGAGGA GATCGCCGAG CGGGTGGTGC TGGCGGGCAT CAACGTGATC
GAATCCAGGA TCACCCGGCT GTCCTACGCC CCCGAGATCG CCCAGGCGAT GCTGCGCCGC
CAGCAGGCCG ACGCGGTTGT CGCCGCCCGG CAGCGCCTGG TGCAAGGCGC GGTGGGCATG
GTGCGCTCGG CCCTGGACGC CCTGAGCGAG GAGGACATCG TCGAACTGGA CGAGGAGCGC
AAGGCCGCGA TGGTCAGCAA CCTGCTGGTC GTGCTCTGCA GCGAGCAGGC GACCCAGCCG
GTCGTGAACA CCGGCACGCT CTACCAGTAA
 
Protein sequence
MTTDQGGQEP TPVAEAAEVQ AAEVPISEQS ARDVSGWGAL GAVIVLAGIA IAVAALTMDA 
TRAWAVIPGG AGLFLLVGLT PVSPGQARVV TLFGQYVGTI RTTGLRWVNP LTSRRQVSTR
VINSETATLK VNDADGNPVE IAAVVVWQVR DTAKAVYAVD DFNDFVAIQT ETAVRHIAGG
YPYDARTEGQ VSLRQNADEI TARMSEEIAE RVVLAGINVI ESRITRLSYA PEIAQAMLRR
QQADAVVAAR QRLVQGAVGM VRSALDALSE EDIVELDEER KAAMVSNLLV VLCSEQATQP
VVNTGTLYQ