Gene Caci_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1824 
Symbol 
ID8333167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2069448 
End bp2070767 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content73% 
IMG OID644954974 
ProductFAD linked oxidase domain protein 
Protein accessionYP_003112586 
Protein GI256391022 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGG CTTCCCTGCT GTCCTTGCGC GACGTCATCC GGGGCGACGT CCTGCTCCCC 
GGCGAAGAGG GCTTCGACGC CGCGCGCAAG CCCTACAACC TGGCGGTCGA GCAGGACGTG
CGCGCCGTGG TGACCGCCGC CGACGCCGCC GACGTCGCCG CGCTGGTCCG CTACGCCAAT
GACGCCGGGG TGCCGATCGC GGTCCAACCC ACCGGCCACG GCGCCTCGGG CACCGCGGCC
GGCGCGATCC TGCTGCGCAC CGGCCGCCTG GACGAGCTGA CCGTCGACCC CGAGGCGCGC
ACCGCCCGTG TCGGCGCGGG CGTCCAGTCC GGCGCGCTCA ACACCGCAGC CGCCGCCCAC
GGCCTGATCC ACAAGCCCGG CAGCTCGCCG ACCGTGTCCG TGGCCGGATA CACCCTCGGC
GGCGGCGTGG GGCTCTTCGC GCGCAAGTAC GGGATGTCCT CGGACCACGT GATCGAGTTC
GAGGTCGTCG ACGCCGCCGG CGAGCACCGC ACGGCGAACG CGCAGGAGAA CCCCGACCTG
TTCCACGCCC TGGTCGGCGG AGGCGGCGAC TTCGCGATCG TGACGGCGCT GACCGTGCGC
CTGCACGAGG AGCCCGAGCT GTTCGGCGGC ACGGTGTTCT GGCCGGAGGC CCGCACCGCC
GAGGTGTTCG CCGCGTTCCG GGACACCACC GCGACGGCGC CGCCGGAGCT GAGCCTATGG
GCGACCCGGG TACAGCTCCC GGGCGGCGCG CCGGCGATGG TGGGCGTGAC GGTCGCCTAT
CTGGGCTCGG AGACGGACGG CCGCGCACTG CTCAAGCCCT TCGACGCGAT CGACGGCGCG
GTGAACGGCG CCTGGCAGCC GATGCCCTTC GAAGACCTCG CAACCATCAC CAACGACCCC
GTCGACCCCG GCCCGAGCCG CTCCCGCGCC GAACTCCTCG GCCGCCTCGA CGCCGACACC
ATCGCCACCC TCCTCGCCGC ACCGATCGCC CCCCTCCTAG CCCTCCAGAT CCGCCACCTC
GGCGCCGCCA TGACCAACAC CCGCCCCGGC CCCCGCGGCC CGGTCACCGA GGAATACCTC
CTCTACCTCC TGGGCCTGGC CTTCACCCCA GAGGTCGGCA CCGCCGTAGC CGCAAAGCAG
GCAGAAGTGG TCGCAGCACT CGGCGACGCC GTAACCGGCG CCAAGCTCGC GACCTTCCTC
GGCCCGACGG ACACGCTGGC CGACACCGTG ACAGCAGCCG AGGCGCAGCG CCTGCGCGAG
GTGAAGGCGA CGTGGGACCC GAAGGGTCGG TTCGTGGCGA ACTATCCGGT GGGGAAGTAG
 
Protein sequence
MSEASLLSLR DVIRGDVLLP GEEGFDAARK PYNLAVEQDV RAVVTAADAA DVAALVRYAN 
DAGVPIAVQP TGHGASGTAA GAILLRTGRL DELTVDPEAR TARVGAGVQS GALNTAAAAH
GLIHKPGSSP TVSVAGYTLG GGVGLFARKY GMSSDHVIEF EVVDAAGEHR TANAQENPDL
FHALVGGGGD FAIVTALTVR LHEEPELFGG TVFWPEARTA EVFAAFRDTT ATAPPELSLW
ATRVQLPGGA PAMVGVTVAY LGSETDGRAL LKPFDAIDGA VNGAWQPMPF EDLATITNDP
VDPGPSRSRA ELLGRLDADT IATLLAAPIA PLLALQIRHL GAAMTNTRPG PRGPVTEEYL
LYLLGLAFTP EVGTAVAAKQ AEVVAALGDA VTGAKLATFL GPTDTLADTV TAAEAQRLRE
VKATWDPKGR FVANYPVGK