Gene Caci_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1650 
Symbol 
ID8332993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1873183 
End bp1874574 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content75% 
IMG OID644954800 
Productprotein of unknown function DUF58 
Protein accessionYP_003112412 
Protein GI256390848 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.559538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCC AACAGAATCA GAGCACGGAG AACACCGACG GCCGCGGCGG ACGGCTGGCC 
GGGCTCACCA CCCGCGGACG GTCCTTCCTG GCCGCCGGGC TGGCCGCCAT GGCCTGCGGC
ATGCTCTTCG ACTACAAGGT GCTGCTGCGG GTCGGCGCGA TGCTGACCAT GCTGCCGCTG
ATCGCGATCA TGGTGCTGGC GCGCACCCGC TACCGGGTGT CGTGCCGCCG CGCGCTGGAG
CCGGCCCGGG TCGGGGTCGG CCAGGAGGCG CGCGTGCACC TGCGGCTGGA GAACGTCTCC
CGGCTGCCCT CGGGCACGCT GCTGGTCGAG GACCGGGTGC CCTACGTGCT CGGTTCGCGG
CCGCGCTTCG TGCTGAACAA GGTCGAGCCG AACGGCCGGC GCCGCGTGGT CTACCGCGTC
CGCTCCGACG TGCGCGGCCG CTATCTGCTC GGCCCGCTGG CGCTGCGCCT GGCGGACCCC
TTCGGGCTGG TGGAGCTGTC GCGCTCGTTC TCGGCGCAGC ACGCGCTGAC GGTGACGCCG
CAGGTCCACG CGCTGCCGAA CGCCCCGGTC GGGCAGGCCT GGAGCGGACG CGGCGAGGGC
CACGCGACCT CGGTCGCCGC GGCCGGCGAG GACGACATCG GTACCCGCGA GTACCGCCAC
GGCGACGACC TGCGCCGCGT GCACTGGCGC TCCACGGCCC GCACCGGCGA GCTGATGGTC
CGGCGCGAGG AGCAGGTCTG GCAGAGCCGG GCGACGATCC TGCTGGACAC CCGCGCGATC
GCGCACCGCG GCGACGGCCC GGCCTCCTCC TTCGAGTGGG CTGTCTCCTC CGCGGCCTCG
ATCGCCCTGC ACATGGCGCG GCACGGCTAC GCGGTGCGGC TGCTGACCGA GACCGGCCAG
GCGGTGACCG CCGCGGCGCA CGACTCCTCG GCGGTCGGCC TGGACTTCGA GGGCATGCTG
CTGGACGCGC TGGCGGTGGT GGAGATGAGC AACGCCGCGA CACTCGCCGG CGCGAACGCG
ATGCTGCGCC AGGGCGGCGG GGACAGCCTG GTGATCGCGG TGCTCGGCGA CCTGTCCGGC
GACGACGCCT CGGAGCTGGC CCGGGTCCGG CACTCCACGA CCTCCGGCGT GGCGTTCGCG
ATGGACACCG CGTCCTGGCT CGGCGGCAAG CCGATGGCCC AGGCGCAGGC CCGGTTCGTC
GGCTCCGCGC AGGTGCTGCG GGTCGGCGGC TGGCGCGTGG TGGAGGTGGA GCCGGGCGAC
CGGCTGCCGG AGCTGTGGGA GCTGGCGGCG CGGCGCGGTT CGGGGATGAG CGGGTCGGTC
GGAGCAGCGG GGACGGCCAC GCCGGCCGCG CCCGCCGGAC CGGCCGGCGC CGAAGTGGGG
GCTGCGCGAT GA
 
Protein sequence
MSAQQNQSTE NTDGRGGRLA GLTTRGRSFL AAGLAAMACG MLFDYKVLLR VGAMLTMLPL 
IAIMVLARTR YRVSCRRALE PARVGVGQEA RVHLRLENVS RLPSGTLLVE DRVPYVLGSR
PRFVLNKVEP NGRRRVVYRV RSDVRGRYLL GPLALRLADP FGLVELSRSF SAQHALTVTP
QVHALPNAPV GQAWSGRGEG HATSVAAAGE DDIGTREYRH GDDLRRVHWR STARTGELMV
RREEQVWQSR ATILLDTRAI AHRGDGPASS FEWAVSSAAS IALHMARHGY AVRLLTETGQ
AVTAAAHDSS AVGLDFEGML LDALAVVEMS NAATLAGANA MLRQGGGDSL VIAVLGDLSG
DDASELARVR HSTTSGVAFA MDTASWLGGK PMAQAQARFV GSAQVLRVGG WRVVEVEPGD
RLPELWELAA RRGSGMSGSV GAAGTATPAA PAGPAGAEVG AAR